Odocoileus virginianus (white-tailed deer): 110138399
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Entry
110138399 CDS
T10722
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110138399 (VPS50)
Membrane trafficking [BR:
ovr04131
]
Protein recycling
Others
EARP complex
110138399 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
110138399
NCBI-ProteinID:
XP_070327645
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All DBs
Position
1:complement(101182441..101304997)
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLRAVESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTTASEG
SNMMGAEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLDVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccggcagggtctgaaaagtcctccagagagcctc
agtgacctccgtgctgttgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacaacctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaggctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgag
agagttacctcattacagacaggtcttcagttagctgctgttatctgcaccaatgggaga
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaatcgaggaacagttggatgttgct
ctgtccaaaatctgcaagaattttgacattaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggagctatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatatcccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactactactgcttctgaaggg
agtaatatgatgggtgctgaagaaacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctt
ggaactgatttgtctatattcaagtatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attaggaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggaactttgtcctgtgaagtcaaatttcagcatc
ttgcaacttcatgaatttaagttcatggaacagtctcgttccccatccgtttcacccagt
aagcagtcatctgcaacttcctcaaaaacagtaaccttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaggccgaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgac
agtgatgtccctgaggaactaaaacgagattttgttgatgagcaaacaggagatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcttttgatgttatccatttcatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcgttg
gaatcaacaggactaggtcttagcagtagtagactaagaacaactctaaacaggatacaa
gaaagcctcattgatctggacgtttcagctgaccccactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccaagtccccacctcagtcacttagtggttctgacatctggg
gacacgttgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggct
gaacagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagacagtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacattgtta
aaggaatttgagcagtttaacatgcggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgcctggctaatagaactattgtg
gaaggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatattagacccattccggataaa
gaatttgtggaaacctatattaaagcatactatctaactgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacaaagcagctgaccaacctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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