Odocoileus virginianus (white-tailed deer): 110138492
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Entry
110138492 CDS
T10722
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110138492 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110138492 (CNOT3)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110138492 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110138492 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
110138492
NCBI-ProteinID:
XP_020751232
UniProt:
A0A6J0XNE0
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Position
20:3029737..3045088
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AA seq
747 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSSQHPQSPAVPPSYPPGPPPAASTLSAAPGSNGAPAAAAPTSALGAKASPA
PSHSAGTPAPYAQAVAPPAPSGPSSTQPRPPSAQPGAGGGGGGGGGNSGGGGGGGKQNGA
TSYSSVVADSPAEAALNSTAGGSSGGQALGPPPGPHNPPPSTTKEPSATAPAGAGGVAPG
SGNNAGAPSLLVPLPVNPPSSPTPSFSEAKAAGSLLNGPPQFSAAPEIKAPEPLSSLKSM
AERAAISSGIEDPVPTLHLTERDILLSSSAAPPASAQPPLQLSEVSIPLSLGVCPLGPVP
LTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRL
STETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIY
FDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgaccgctgcctcaagaaggtgtctgag
ggcgtggagcaatttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaacaccatcgacaccctgaacatgcaggtggac
cagtttgagagcgaagtggagtccctgtcagtgcagacgcgcaagaagaagggcgacaag
gataagcaggaccggattgagggcctgaagcggcacatcgagaagcatcgctaccacgtg
cggatgctggagaccatcctgcgcatgctggacaacgactccatcctggtggacgccatc
cgcaagatcaaggacgacgtcgagtactacgtggactcgtcccaggaccccgacttcgag
gagaatgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagcacg
cccacctcgaccacctccagctcccccatcccacccagcccagccaactgcaccacggaa
aactcagaagatgacaagaagagggggcgctcgacggacagtgaagtcagccagtctcca
gccaaaaacggctccaagcccgtccacagcagccagcaccctcagtccccggctgtgccg
cccagctacccgcccggccccccacctgccgcctccaccctgagcgctgcccctggcagc
aacggcgccccggctgcagccgcccccacgagcgccctgggtgccaaggccagcccggcg
cccagccacagcgcgggcacccccgccccctacgcccaggctgtggccccgccagccccc
agtgggcccagcagcacccagccccggccccccagcgcccagcctggggcgggaggcggc
ggcggaggtggtgggggcaacagcggcggaggcggaggcggtggcaagcagaacggcgcc
accagttacagctcggtggtggcggacagcccggcagaggcggcgctcaacagcacagcg
ggtggcagctcgggtggccaagccctgggccccccgcccggcccccacaacccgcctccc
agcaccacgaaggaacccagcgccacagccccagcgggtgccgggggcgtggccccaggc
tcagggaacaacgcgggggcacccagcctcctggtgccgctccccgtgaacccccccagc
tccccgacacccagcttcagtgaagccaaggcagctggcagcctgctgaacgggcctccg
cagttcagcgccgcacctgagatcaaggcccccgagcccctgagctccctgaagtccatg
gcggagcgtgcggccatcagctctggcatcgaggaccccgtgcccacgctgcacctgacc
gagcgagacatcctcctgagcagcagcgcggcgcccccggcctcggcccagccccccctg
cagctgtcggaggtgagcatcccgctgtcgctgggcgtgtgtccgctgggcccggtgccc
ctcaccaaggagcagctgtaccagcaggccatggaggaggctgcctggcaccacatgccc
cacccctcggactcggagcgcatccggcagtacctgccccggaacccctgcccgacgccc
ccctaccaccaccagatgccgcccccacactcggacaccgtggagttctaccagcgcctg
tccaccgagacgctcttcttcatcttctactatctggagggcacaaaggcgcagtacctg
gcagccaaggccctgaagaagcagtcctggcggttccacaccaagtacatgatgtggttc
cagaggcacgaggagcccaagaccatcacggatgagtttgagcagggcacctacatctac
tttgactacgagaagtggggccagcggaagaaggaaggcttcacctttgagtaccgctac
ctggaggaccgggacctccagtga
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