Odocoileus virginianus (white-tailed deer): 110138533
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Entry
110138533 CDS
T10722
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110138533 (SHOC1)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
110138533
NCBI-ProteinID:
XP_070315388
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Position
31:11075373..11165869
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AA seq
1503 aa
AA seq
DB search
MFPAFKYCAIDYLNESVVRKKLCKDALLLRIPSCLYQDDNYPASVTDNKFRRPWTRVSAV
SILGKTDISVLDQWKASLTVDDFLEKETVTGMVTQLNCEFEEIVPSSNPNSQTEAEEASL
YTHKEYKEFFTLVTCLEKCPSLQAQKQDLSIDEEIIFVSYLMAYKSHLPTLHTLLSRLKL
FLVKDPLPDFKAQISTEAKFFRECFSFQGDVKCFVKEDFYMDKEDFCQEKLKDTSSTLLE
CELLVPISHKQEVDIPSLSEPNESLNLMPEIINYADENENLSKTDLTIKHGVDLEDIKCS
STEILTIQNQYEPEYRQPVELEMPLTPLDITNHHSSVNSLCAELQTFPSSPVCKINLLTA
EESANKYHMLLQLESCRSSLNSFFIRVPRTEEPNNRYSPTDLKKIFSVEEEKLVVNPINA
EWWKEARLNLTETLEPLSTYLCHNNLSSDDTKLEEFLPTSVPQLESWLEHEDCSFPLTLI
NEQSTNDHLSPPQKTPSPTNEVSDLHLSDECVSVERPRKEEKPKNDLELGYGIIQNKENK
DHLELDSPVPSTESSSSSKVEKASFKHGKKWENNLDLLSDFIMLRNKYPTCTSKTEVTDN
DGKDELQNEELSLTLQEESPIVCNNKTLERTSQEKRADNVIEIPASDSQCQAYCLLEAAA
SPILEKLVCLCTLPAANWKFATVIFDQTRFLLKEQEKIISDAIHEGKNDEREMTFKYAAL
LHLLVTIRDVLLTCNLDTALGYLSNAKDIYKSVFGSCLYDIWRQLEIVQFIRGKKPETNY
KIRELQCQILNWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSNKRKDFL
ESEGVLNSTSFCVVVPNQYIGADFPWSNFSFVVEYNFVENSCWTEHCEKLNIPYMAFKVI
LPDTILKRSTLLDSFGGFLLEIQIPYMFFASEGLLNTPQILQLLESNYNITLVERCCSES
LKLFGGTEHYVVMTIDEHTAVILQDLEELNYEKASDNIIMRLMALSFQYSYCWIILYAKK
PLNSEYHLTEKTLHHLALIYAALVSSGLKSEELDVKLIIAPGVEETALMIRQIADHNLMT
SKRDPREWLDKSWLKVAPSKEEMYLLDFPSITPLVAQLMLNKGPSLNWILLATLCQLQEL
LPEVPEKVLKHFCGITSLFKISPSIKKSPQISSPRENRDQTRTFTSQSSASAPSDSVIQE
HNNYQYSDLGERVHEDTNSTSNYNSSLMELKEMPGILPSVSSYNQTSHWKESSCNPNMVQ
NNSFLMNIEARNLSGNSFLNQNDSESDVFSLGLTEMNYETIISPIDTQERVTPHFINYQK
KGTHEKKGPIKKELSAPVFSIEGSQSPLHWNFKRNVWEQQNHSFNLQCGAEQSTCDKWYS
QKDNLFINQQKYQLDELEGFICKSSNAGTKKTFWKELPSVPSLDLSCASDSNVNQKEFNS
LYFYQRAGKCLGQKTCSESSSNSGDNNSLTDITCLQQPQSKKQRLVYEKVPGRLDGQTRL
RFF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcattcaaatattgtgcaatagattatttgaatgagagtgtggttagaaag
aagttgtgcaaagatgctttattgcttcggatcccttcatgtttatatcaagatgacaat
tatcctgcaagtgttactgataataagtttaggaggccatggacaagagtttcagctgtt
tcaattttgggaaagacagatatctcagtcttggatcaatggaaagcaagtctcactgtg
gacgacttccttgagaaagaaacagttacaggaatggtgacccagcttaactgtgaattt
gaggaaattgtcccgagttcaaacccaaactcccaaactgaagcagaggaagccagcttg
tatacccataaggaatataaggaattctttacacttgtcacctgcttagaaaaatgtcca
tcacttcaagcacagaaacaagatttgtctattgatgaagaaataatttttgtaagttat
ttgatggcctataaaagtcacctaccaactttgcacactctgttgagtaggctaaaacta
tttttagtaaaggatcccttgccagatttcaaagcacagatctccacagaagctaaattt
ttcagggagtgtttctcttttcaaggagatgtaaaatgttttgtgaaagaagatttttac
atggataaagaggacttttgtcaggagaaactgaaagatacatcatcaactttgcttgaa
tgtgaattgttagtacctataagccacaaacaagaagttgatattccatcactctcagaa
ccgaatgagtcattaaacttaatgccagaaataataaattatgcagatgaaaatgaaaac
ctttccaaaacagatcttactatcaagcatggagttgaccttgaggatataaaatgcagc
tccacagaaattttgaccattcaaaatcaatatgaaccagagtacaggcaaccagtagag
ttagaaatgccattaactcctctagacataacaaaccaccattcttcagtgaattcatta
tgtgcagaacttcagacatttccatcttctcctgtttgtaaaattaatttgcttactgct
gaagaatcagctaacaaataccatatgctattgcagttagaaagctgccgaagctctctg
aactcatttttcattagagtgccaagaactgaagagcccaacaatcgatattcacccaca
gatttgaaaaagatattttctgttgaagaagaaaaacttgtggttaatcctataaatgca
gagtggtggaaagaagcaagactaaatctgacagaaactttggaacctctaagtacatat
ttgtgtcataataatttatcttctgatgatactaaactggaggaatttttacctacaagt
gtgcctcaattagaatcatggttagaacatgaagattgttcctttcctcttacacttatt
aatgagcaatctacaaatgatcatttatcacctccacaaaagactccatctccaactaac
gaagtgtcagacttgcatctttctgatgaatgtgtctctgttgaaagaccaagaaaagaa
gaaaaaccaaagaatgacctagaactaggttatggaataatccaaaataaagaaaataaa
gatcacttggaacttgacagcccagtaccatctactgaatcatcttcctcttcaaaagtt
gaaaaagcatcttttaaacatggtaaaaaatgggagaataatttggaccttttgagtgac
tttattatgctgcgaaataagtatccgacttgtacctcaaagactgaagtcacagacaat
gatggaaaagatgaacttcaaaacgaagaactttctttgactcttcaagaagaaagccct
attgtttgtaataataaaaccctagagagaacaagtcaggaaaagagagcagataatgtc
atcgaaattccagcatcagatagccagtgccaagcatattgtctcctggaagcagcagct
tctcctatcttagaaaaacttgtatgcctctgtactcttcctgctgctaactggaaattt
gctactgtcatttttgaccaaacaaggttcctcttgaaagaacaagaaaaaataataagt
gatgctattcatgaaggtaaaaatgacgaaagagaaatgacattcaagtatgctgctctc
ttacaccttttggtaacaattagagatgtccttttaacctgtaacttggacacagcattg
ggatatttgtcaaatgcaaaagatatctacaaaagtgtttttggttcctgtttgtatgat
atttggcgacaactggagatagtacagtttataagggggaaaaagcctgaaaccaactat
aagatacgagaactgcaatgtcagatactaaattggatgcaaagtgaacagcaaattaag
gtgctgattataataagaatggattcagatggtgaaaagcatttactcattaaaatcctt
aacaaaatagaaggtttgacactgactgtcttacattcaaacaaaagaaaagactttctg
gaatctgaaggtgttttaaacagtacaagtttctgtgtagttgtacccaatcaatacatt
ggagcagatttcccgtggagtaatttctcatttgtggtggaatacaattttgtagaaaac
tcttgttggactgaacattgtgaaaaattgaatattccttacatggcctttaaagtgatt
cttccagacacaattttaaagagaagcaccttgctggatagttttggtggctttctcttg
gaaattcagattccatatatgttttttgcatctgaaggacttcttaatactccacaaata
ctacagttgttagaatccaactataatatcacactagtggagagatgctgcagcgagtca
ctgaaactctttggaggtacagagcattatgtggtgatgacaattgatgagcacactgct
gtaattttgcaggacctagaagaattaaactatgagaaggcatcagacaatatcattatg
agactgatggcattatcattccagtacagctattgttggataattttatatgccaaaaag
ccattaaactcagagtaccatcttacagaaaagactcttcatcacctagcactgatttat
gcagctttggtttcatctgggctaaaatcagaagaactggatgtaaagcttataattgcc
ccaggagtggaagagactgcactgatgattcgacaaattgctgaccacaatttaatgacc
tcgaagagagatcctcgtgaatggttggataagtcctggcttaaagttgcaccatctaag
gaagaaatgtacttacttgattttccaagtattactccattggtggctcagctcatgtta
aataaaggaccttcactgaactggatattgttagcaactctttgtcaacttcaggaactc
ctacctgaagttccagaaaaagtgttaaagcatttttgtggcatcacttccttattcaag
attagtccttccataaaaaaatcacctcaaatttcatcacctcgggaaaacagggatcag
actagaacctttacttctcagagttcagcttctgcaccttcagattctgtcattcaagaa
cataataattatcaatattcagatttaggagagagagtacatgaagacaccaacagcact
tcaaattataactcttcccttatggaattaaaagaaatgccaggcattttaccatctgta
agttcttataatcagaccagccattggaaagagtctagttgtaaccctaacatggtacag
aataattcttttctgatgaatatagaagcaaggaatctgtctggtaattcttttctgaac
cagaatgattcagagtcagatgtcttttctttgggtctaacagaaatgaattatgaaact
ataatatcaccaattgacactcaggagagagtcacccctcactttataaattatcagaaa
aagggaacacatgaaaaaaaaggacctataaaaaaagaattgtcagctcctgtcttttca
attgagggttctcaatctcctcttcattggaactttaagagaaatgtatgggaacaacag
aatcattcattcaacttacagtgtggagcagagcaaagtacatgtgacaaatggtactct
caaaaagataatttattcattaatcagcaaaaatatcagttggatgagttagaaggcttc
atctgtaaaagttcaaatgctgggactaaaaagactttctggaaagaattaccatctgtc
cccagtttggatttatcctgtgcttctgattctaatgtaaatcaaaaagaattcaacagt
ctttatttctaccaaagagctggaaaatgtttaggacagaaaacgtgctctgagtcttca
tctaactcaggagacaacaactcattaacagatatcacgtgcttacaacaaccgcaatcc
aaaaaacaacgtcttgtgtatgaaaaagtccctggtagacttgacggacaaactcgtctg
aggtttttttga
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