Odocoileus virginianus (white-tailed deer): 110138687
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Entry
110138687 CDS
T10722
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00562
Inositol phosphate metabolism
ovr01100
Metabolic pathways
ovr04070
Phosphatidylinositol signaling system
Brite
Enzymes [BR:
ovr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
110138687 (SYNJ1)
Membrane trafficking [BR:
ovr04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
110138687 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110138687
NCBI-ProteinID:
XP_070311258
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Position
25:complement(49785036..49874685)
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AA seq
1574 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
GLLGVLRLNLGDIMLHYLVLVTGCMSVGKIQESEVFRVTSTEFMSLRVDSSDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSVQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
YGIFHFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVSRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDDFVEIARKLSFPMGR
LLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
VSIRSSLPENNFFNDALIDELLQQFTNFGEVILIRFVEDKMWVTFLEGSSALSVLNLNGK
ELLGRTITITLKSPDWIKTLEEEMSLEKINVPLPSSTSSTLLGEDAEVTADFDMEGDVDD
YSAEVEEILPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPG
PPASQNSPVDALPATQLQQKESSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAP
ARKEFGGGGAPPSPGVARREMEAPKSPGTTRRDNLGRSQPPPQAGLPGPGLAGHSAARPI
IPPRAGVISAPQSHARASAGRLTPESQSKPSEVQKGPALLPEPLKPQAALPVPPSLPPPL
QKMQEPLIPVAAPLTQAALQPSLETPPQPPPRSRSSHSLPSEPPAQPQVKTNGVCTVRLD
SPVKSDPFEDLSLTLLAVSKAQPSVHTPSPRGLTPLPSATPSNANTLSSVSCMPTMPPIP
ARSKAQENMRRSPNPFIPSSSSTNPFTDRTAVPGNPFRAESQESEATSWFSKEEPVAQSP
FSSLRPLGQNSSKPSSSLDGFKDSFDPQGPPVLTVSNPKGWVTFEEEEDFAVTGKSGSTR
PDVFLGKQPSSSPGSKVTLGDDWGRSTNVSFCVLPARRPPPPPVPLLPPGTTPPADPFTA
LASKVSPTLDLTER
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaaggatttcggatctatcacaaattggatcccccacctttcagcctc
atagtggaaaccaggcacaaggaagaatgtctcatgttcgagtctggggctgtagcggtg
ctctcatcagcagaaaaagaggcaatcaagggtacatactccaaagttctagatgcctat
ggacttttaggtgttttacgattaaatcttggtgatattatgttacattatctggtccta
gtcactggatgtatgtctgttgggaaaattcaagaatctgaagttttccgagttacttcc
actgaatttatgtcactgcgagttgattcttcggacgaggatcgcatttcggaagtgcga
aaagttttaaattcaggaaacttttattttgcatggtctgcatccggagtcagtttggat
ctgagtcttaatgcccaccgtagcgtgcaagaacacacaactgacaatagatttttctgg
aatcagtctttgcacttgcatctcaagcactacggtgtgaattgtgacgactggttatta
cgcctcatgtgtgggggagtagaaatcagaacaatttatgctgctcataaacaggcaaag
gcttgcctcatttccagactgagctgtgaacgagctgggaccaggtttaacgtccgggga
acaaatgatgatggtcacgtcgccaattttgtagaaacggaacaggttgtgtacttagat
gactctgtttcttccttcatacaaatccggggatctgtcccattgttctgggagcaacca
ggattgcaggtgggatcccatcgtgttcgtatgtcaaggggatttgaagccaatgcaccc
gcttttgacaggcattttaggacacttaagaatttgtatggtaaacaaataatagtaaat
ctgcttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatctgaaa
gcttctgaacatgctgctgatatccagatggtgaattttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacatagtgttcttaaacctcaagtccaaaagtttctggat
tatggaatttttcattttgatggaagtgaagttcaaaggtgccagagtggtacagttcga
acaaactgcttggattgtcttgacagaacaaatagtgtgcaggcattccttggattagag
atgctgactaaacagttggaagctcttggtttagctgaaaagcctcagttggtgactcgc
tttcaagaagtttttcgatcaatgtggtctgtgaatggtgattcaataagtaagatttat
gcaggaactggagcccttgaaggaaaggctaaggctggaaagttaaaagatggtgctcgt
tcagttagtagaacaattcagaataacttctttgacagctccaagcaagaagcaattgat
gttttgctcctgggaaatactctaaatagtgatttagctgacaaagctcgagccctttta
actactggaagtttgcgtgtttctgaacagacattacagtcagcatcttctaaagtccta
aagagcatgtgcgagaatttctacaagtattcaaagcccaagaaaattcgagtatgtgtg
ggcacctggaacgtgaatggcgggaagcagtttcgcagcatagcttttaagaatcagacc
cttacggactggcttcttgatgcccccaagttagctggcatccaggagtttcaagataaa
agaagtaaaccaatggatatatttgcaattggttttgaggaaatggtagagttgaatgct
ggaaacattgtgaatgcaagcacaacaaatcagaaactctgggctgtggaacttcagaag
accatctccagagacaacaagtatgtactgctggcctctgagcagttggtgggcgtctgt
ctgtttgtttttatcagaccacagcacgctccattcatcagggatgttgcggttgatact
gtgaaaactggaatgggaggcgcaactggaaataagggagcagttgcgatacggatgctg
ttccacaccacaagcctctgctttgtctgcagccacttcgctgcagggcagtcccaggtc
aaagagcgaaatgacgattttgtagaaatagctcggaagttgagttttccaatgggaagg
ctgctcttctcccatgactatgtgttttggtgtggtgatttcaactaccgaatcgatctc
cctaatgaggaagtgaaggagcttatcagacagcaaaactgggattctcttattgcagga
gatcagcttatcaatcagaaaaatgctggacagatttttagaggatttttagaaggaaaa
gtgacctttgctccaacgtataaatatgacttgttttctgatgactacgatactagtgaa
aagtgccgcacccctgcatggacagaccgtgtcctctggagaagacggaagtggcctttt
gatagatcagctgaagatttagatctcctaaatgctagttttcaagatgaaagcaaaatc
ctctacacttggactcctggcactttgctgcactacggaagggccgagctaaagacttct
gaccataggcctgtcgttgccctgatcgatattgatatatttgaagttgaagctgaagag
aggcaaaacatttataaggaagtaatcgcagttcagggtccaccagatggcacggtgctg
gtctcaatcaggagctctttaccggaaaataattttttcaacgatgctttgattgatgag
cttttacagcagtttacaaattttggtgaagttatactcataagatttgtggaagataaa
atgtgggttacatttttggagggaagctctgccttgagtgttctgaacctgaatgggaaa
gagttattgggtaggactataacaattactttaaaaagtccagactggatcaaaactttg
gaagaagaaatgagcttagagaaaatcaacgtccccttgccatcatcaaccagctcaacc
ctcctaggtgaagacgcagaggtcactgccgacttcgatatggaaggtgatgtggatgac
tatagtgctgaggtagaggagatccttcctcagcatctccagccgtcttccagttctggc
cttggcacgtcccccagttcttcaccccggaccagtccctgccagtcacctaccatatcg
gagggacccgtgccttccctcccagtgagaccaagtcgagctccgtccagaacacctggg
ccccctgcttcacagaattctcctgtagacgccctgccagcaacacagctacagcagaaa
gaatcttcccagaccctggaacccaagcggcctccccctccccgcccggttgctcctccc
gcacgtccagctcccccacaacgaccgcctccgccttcaggggctaggagtcctgcacct
gctagaaaagagtttggaggtggtggagcccctcccagtccgggggtagctaggcgagag
atggaagcgcccaaaagccctggaacaacacggagagataatctaggacgcagccagcct
ccacctcaagccggactgccaggcccgggacttgccggacacagtgcagccagaccgatt
attccaccccgtgctggagtcatcagcgccccccagagccacgcacgggcatctgctggg
agactgactcctgaaagccaaagcaaaccctcagaagtacagaaagggccagctcttctt
cctgaacccctgaagcctcaggccgcccttcctgtgccgccttctctgccgccacctctt
cagaagatgcaggagcctctcatcccggtggccgcacctctgacccaggctgccctgcag
cccagcctggaaacgcccccacagccgccccctcggagcaggtcgtcccacagcttgcct
tctgaacctcctgcgcagccacaggtgaaaacaaacggagtctgcaccgtcagactggac
tcgccagtaaagagtgacccatttgaagacttgtcattgaccctgcttgctgtgtcaaag
gctcagccatctgttcacaccccaagcccaagggggctgacgccgttgccttctgcaacc
ccaagtaacgcaaacactctgagttctgtaagctgcatgccgacaatgcctccaattcca
gcccggagtaaagcccaggaaaacatgcgacgttccccaaatccattcatcccaagctca
agcagcacaaatccttttactgacaggactgccgttcccggaaacccatttcgagctgag
tctcaagaatcagaggccacttcatggttctccaaagaagagcctgttgctcagagtcca
ttctcttcgctgaggcctctgggtcagaacagtagcaagccttcatcctccctggatggg
tttaaggacagttttgatccgcagggcccgcctgtactaacagtcagcaaccccaaagga
tgggtaaccttcgaggaggaagaggactttgctgtgacagggaagtcagggtccactcgt
ccagatgttttcctgggtaagcagccgagctcatctcctggctccaaggtgacgcttggt
gatgactggggtagaagtaccaatgtgtctttctgtgtgttgccagcaagaagaccaccc
ccaccgcctgtccctctgctcccacctggcaccacccctcccgcagaccctttcacagcc
ctggcctctaaggtatcacccacactagacttgacggaaagataa
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