Odocoileus virginianus (white-tailed deer): 110138783
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Entry
110138783 CDS
T10722
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr03083
Polycomb repressive complex
ovr04110
Cell cycle
ovr04213
Longevity regulating pathway - multiple species
ovr04330
Notch signaling pathway
ovr04350
TGF-beta signaling pathway
ovr04613
Neutrophil extracellular trap formation
ovr04919
Thyroid hormone signaling pathway
ovr05016
Huntington disease
ovr05031
Amphetamine addiction
ovr05034
Alcoholism
ovr05165
Human papillomavirus infection
ovr05169
Epstein-Barr virus infection
ovr05200
Pathways in cancer
ovr05202
Transcriptional misregulation in cancer
ovr05203
Viral carcinogenesis
ovr05206
MicroRNAs in cancer
ovr05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110138783 (HDAC1)
03083 Polycomb repressive complex
110138783 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110138783 (HDAC1)
04350 TGF-beta signaling pathway
110138783 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110138783 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110138783 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110138783 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
110138783 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110138783 (HDAC1)
05202 Transcriptional misregulation in cancer
110138783 (HDAC1)
05206 MicroRNAs in cancer
110138783 (HDAC1)
05203 Viral carcinogenesis
110138783 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
110138783 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110138783 (HDAC1)
05165 Human papillomavirus infection
110138783 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
110138783 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
110138783 (HDAC1)
05034 Alcoholism
110138783 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110138783 (HDAC1)
Enzymes [BR:
ovr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110138783 (HDAC1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110138783 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
110138783 (HDAC1)
BRAF-HDAC complex
110138783 (HDAC1)
REST complex
110138783 (HDAC1)
SHIP complex
110138783 (HDAC1)
MiDAC complex
110138783 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110138783 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
110138783 (HDAC1)
Chromatin remodeling factors
NuRD complex
110138783 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110138783
NCBI-ProteinID:
XP_070315191
LinkDB
All DBs
Position
30:42356491..42388729
Genome browser
AA seq
482 aa
AA seq
DB search
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVK
LA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagactcagggcaccaagaggaaagtctgttactattacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttactccttaactatggtctctaccggaagatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaattcttacgctccatccgc
ccagataacatgtctgagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtatttgatggcctgtttgagttctgtcagctgtctactggtggctctgtggcaagt
gccgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctacac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgagtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggacctacgggatattggagctggcaaaggcaag
tattatgctgttaactaccctctccgagatgggattgacgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcccagtgcagttgtgttgcag
tgtggctctgactccctgtctggggatcggttaggctgcttcaatttgaccatcaaaggg
catgccaagtgtgtggaatttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggtggctataccattcgtaatgtcgcccggtgctggacatatgaaacagctgtggccctg
gacacggagatccctaatgagcttccatacaatgactacttcgaatactttggaccagat
ttcaaacttcatatcagtccttccaatatgactaaccagaacactaatgagtacctggaa
aagatcaaacagcgactgtttgagaacctgagaatgctgccccacgcacctggggtccaa
atgcaggccatccccgaggacgccattccagaggagagtggcgatgaggatgaagaagac
cctgacaagcgcatctcaatctgttcctcggacaaacgaattgcctgtgaggaagaattc
tccgactctgatgaggagggagaaggcgggcgcaagaactcttccaacttcaagaaagcc
aagagagtcaaaacagaagatgaaaaagagaaagatccagaagagaagaaagaagtcaca
gaagaggagaaaaccaaggaagagaagcaagaagccaaaggggtcaaggaagaggtcaag
ttggcctga
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integrated database retrieval system
