Odocoileus virginianus (white-tailed deer): 110138918
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Entry
110138918 CDS
T10722
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03272
Virion - Hepatitis viruses
ovr03273
Virion - Lassa virus and SFTS virus
ovr04140
Autophagy - animal
ovr04142
Lysosome biogenesis
ovr04145
Phagosome
ovr05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110138918 (LAMP1)
03272 Virion - Hepatitis viruses
110138918 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110138918 (LAMP1)
04142 Lysosome biogenesis
110138918 (LAMP1)
04140 Autophagy - animal
110138918 (LAMP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
110138918 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110138918 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ovr04147
]
110138918 (LAMP1)
04090 CD molecules [BR:
ovr04090
]
110138918 (LAMP1)
Membrane trafficking [BR:
ovr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
110138918 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
110138918 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
110138918 (LAMP1)
Exosome [BR:
ovr04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
110138918 (LAMP1)
CD molecules [BR:
ovr04090
]
Proteins
110138918 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Herpes_IE68
DUF7497
Motif
Other DBs
NCBI-GeneID:
110138918
NCBI-ProteinID:
XP_070327459
UniProt:
A0ABM4II17
LinkDB
All DBs
Position
8:complement(24277367..24289186)
Genome browser
AA seq
438 aa
AA seq
DB search
MAALGGARRRPLVLLLFAGLVHGASAVFVVKNGNGTACVMADFSATFLTSYDTRSGPQNV
SFNLPPGAEVSNSSSCGKENASDPSLMITFGRGHMLTLTFTRNATRYKVQLMHFAYNLSD
TDIFPNSSSTGVKTVESVTDIKADINKTYRCVSDTRVHMGSVTVTLRNTAIQAYLSGSNF
SREETRCEQDLPTPATPTAPPQPSPTPAPASPTVFRYSVNGTNGTCLLVSMGLQLNVTYR
TVDNKPLPPCRFRLLTPGAGGRGAEPLLSSQTVTREFNVNPDNTTFGGNCSATLATLELY
DRNLLFLVLQFSLNESSSRVFLQGVQLNLTLPDARGHSFTASNSSLSALQATAGSSYKCD
AEQRLRVTSTFSLNMFRVWVQAFRVDGGKFGPVEECQLDENSMLIPIAVGGALAGLVLIV
LIAYLIGRKRSHAGYQTI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctcggcggcgcccggcgacggccgctggtcctgctgctgttcgcaggcctc
gtgcacggcgcatcggcagtttttgtggtgaagaatggcaacgggaccgcctgcgtcatg
gccgacttctctgctaccttcctgaccagctacgacaccaggagtgggccccagaacgtg
tccttcaatctgccacctggtgcagaagtgtcaaacagcagctcctgtggcaaagagaat
gcttctgaccccagtctcatgatcacttttggaagaggccacatgctgaccctcactttc
accagaaatgcaacacgttacaaggtccagctgatgcactttgcttataacttgtcagac
acagacattttccccaattcgagctccacaggagtcaagactgtggagtcggtgaccgac
atcaaggccgacatcaataaaacgtaccggtgtgtgagtgacacccgggtccacatgggc
agcgtgacagtcacgctccgaaacaccgccatccaggcctacctgtccggcagcaacttc
agcagggaggagacgcgctgtgaacaggacctgcccaccccggccaccccgaccgcaccc
ccccagccctcgcccaccccagctcccgcgagccccacggtgttcaggtacagcgtgaat
ggcaccaacggaacctgtttgctggtcagcatggggctgcagctgaacgtcacctacaga
acagtcgacaacaagccactgcctccttgccgcttccgcctgctcacgcctggagctggt
gggcggggagctgagcccttgctctcctcacagacggtgaccagagagttcaacgtcaac
cccgacaacaccaccttcgggggcaactgctccgccacgctggcaaccctggagctctac
gacaggaacctcctgttcctggtgcttcagttctcattgaacgagagctccagccgggtt
ttcctgcaaggagtccagctgaaccttactctgcccgacgccagaggccacagcttcacg
gcctccaacagctcgctgagcgcgctacaggccactgcggggagctcgtacaagtgcgac
gccgagcagcgcctgcgggtcaccagcaccttctccctcaacatgttcagagtgtgggtg
caggccttccgtgtggacgggggcaagtttgggcctgtggaggagtgccagctggatgag
aacagcatgctgatccccatcgctgtgggtggcgccctggccgggctggtcctcattgtg
ctcatcgcctacctgatcggccgcaagaggagccacgccggctaccagaccatctag
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