Odocoileus virginianus (white-tailed deer): 110138946
Help
Entry
110138946 CDS
T10722
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04066
HIF-1 signaling pathway
ovr04137
Mitophagy - animal
ovr04140
Autophagy - animal
ovr04148
Efferocytosis
ovr04659
Th17 cell differentiation
ovr04919
Thyroid hormone signaling pathway
ovr05167
Kaposi sarcoma-associated herpesvirus infection
ovr05200
Pathways in cancer
ovr05205
Proteoglycans in cancer
ovr05208
Chemical carcinogenesis - reactive oxygen species
ovr05211
Renal cell carcinoma
ovr05230
Central carbon metabolism in cancer
ovr05231
Choline metabolism in cancer
ovr05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
110138946 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110138946 (HIF1A)
04137 Mitophagy - animal
110138946 (HIF1A)
04148 Efferocytosis
110138946 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110138946 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110138946 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110138946 (HIF1A)
05205 Proteoglycans in cancer
110138946 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
110138946 (HIF1A)
05230 Central carbon metabolism in cancer
110138946 (HIF1A)
05231 Choline metabolism in cancer
110138946 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
110138946 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
110138946 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
110138946 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110138946 (HIF1A)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110138946 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
110138946
NCBI-ProteinID:
XP_020752076
UniProt:
A0A6J0XS90
LinkDB
All DBs
Position
6:61427802..61475485
Genome browser
AA seq
823 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEVPLYNDVMLPSSNEKLQNINLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENSSTSPQNASTNTVFQ
PAQMQEPPVATATTTATSDELKTVTKDGMEDIKILIAFPSPPHVPKEPPCVTTSPYSDTG
SRTASPSRAGQGVIEQTEKSHPRSPNVLSVALSQRTTAPEEELNPKILALQNAQRKRKIE
HDGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLL
GQSMDESGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccgggggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagag
aagtctagagatgcagccagatctcgtcgaagtaaagagtctgaagttttttatgagctt
gctcatcagttgccactccctcataatgtaagctcgcatcttgataaggcttctgttatg
aggctcaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgcttttatttgaaagccttggatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataatgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccttgtaaaaaagggtaaagag
caaaatacacagcggagcttttttctcagaatgaagtgtaccctaactagccgggggaga
actatgaacataaaatctgcaacatggaaagtacttcactgcacaggccatattcatgta
tacgataccaacagtaaccaatctcagtgtgggtataagaaaccaccaatgacatgcttg
gtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagacagcaag
acttttctcagtcgtcacagtctggatatgaaattttcttattgtgatgaaagaattaca
gaattgatgggatacgagccagaagaacttttgggccgctcaatttatgaatattatcat
gccttggactctgaccatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
acaacaggacagtacagaatgcttgccaaaagaggtggatatgtctggattgaaactcaa
gcaactgtcatatataacactaagaactctcagccccagtgcattgtatgtgtaaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
ctcaaacctgttgaatcttcagacatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagcagtctctttgataaacttaagaaggagcctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagattttggcagcaatgacacagagact
gatgaccaacaacttgaggaagttccattgtataatgatgtaatgcttccctcatctaat
gagaaattacagaatataaatttggcaatgtctccattacctgcctctgaaactccaaag
ccacttagaagtagtgctgaccctgcactcaaccaagaagttgcgttaaagttagaacca
aatccagagtcactggaactttcttttaccatgccccagattcaagatcagccagctagt
ccttctgatggaagcaccagacaaagttcacctgagcctaacagtcccagtgaatattgt
tttgatgtggatagtgatatggtcaatgaattcaagttggaattggtagagaaacttttt
gctgaagatacagaagcaaagaatccattttccactcaggacactgatttagacttggag
atgttagctccttatatcccaatggatgatgacttccagttacgttcctttgatcagttg
tcaccactggaaaacagttctacaagtcctcaaaatgcaagcacaaatacagtattccag
cccgctcagatgcaagagcctcctgtagccaccgccactaccacagccaccagtgatgaa
ttgaaaacagtgacaaaagatggtatggaagacattaaaatactgattgcgtttccatct
cctccccacgtacctaaagaacctccttgtgtcacaacgtcaccatatagtgatactgga
agtcggacagcctcacccagcagagcaggacaaggagtcatagaacagacagaaaagtct
catccaagaagccctaatgtgttatctgtcgctttgagtcaaagaactactgctcctgag
gaagaactaaatccaaagatactagctttgcagaatgctcagagaaagcgaaaaattgaa
catgatggttcactttttcaagcagtaggaattggaacattattacagcaaccagatgat
cgtgcaactaccacatcactttcttggaaacgtgtaaaaggatgcaaatctagtgaacag
aatggaatggagcaaaagacaattattttaataccctctgatttagcatgtagactgctg
gggcaatcaatggatgagagtgggctgccacagctgaccagttacgattgtgaagttaat
gctcctgtacaaggcagcagaaacctactgcagggcgaagaactactcagagctttggat
caagttaactga
DBGET
integrated database retrieval system
