Odocoileus virginianus (white-tailed deer): 110139073
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Entry
110139073 CDS
T10722
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110139073 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110139073 (SF3B3)
03041 Spliceosome [BR:
ovr03041
]
110139073 (SF3B3)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110139073 (SF3B3)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110139073 (SF3B3)
Spliceosome [BR:
ovr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110139073 (SF3B3)
Complex B
110139073 (SF3B3)
Complex C
U2 SnRNP specific factors
110139073 (SF3B3)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110139073 (SF3B3)
TFTC complex
110139073 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
110139073
NCBI-ProteinID:
XP_020752310
UniProt:
A0A6J0XRV9
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacctgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaacaaaacaacaggaaattgttgtttcccgaggaaagatcttggaactt
cttcgccctgatcccaacactggcaaagtacacactctgctaactgtggaagtatttggt
gtcatccggtcactcatggcttttaggttgacgggtggcacaaaagactacattgtggtt
ggcagtgactcaggtcgaattgttatcctggagtaccagccatctaagaatatgtttgag
aagattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgagaaacagaaattg
gtgtacatcttgaacagagatgctgcagctcgacttaccatttcatccccactggaggct
cacaaagcaaacactctagtgtatcatgtagttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca
gcagctaatacccagcagacgcttactttctatgaattagaccttggtttaaatcacgta
gtccgaaaatacagtgagcctttggaggaacatggaaacttcctaattacagttccaggg
ggatcagatggtccaagtggagtgcttatctgctctgaaaactacattacttataagaac
tttggtgaccagccggatatccgctgtccaatccccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgcaacccataagaccaaatcgatgttcttc
tttttggctcaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccgactcaaatattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaattcggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacattcttctttcagccaagaccactgaaaaaccttgtgttggttgatgaa
ttggacagcctctctcccattttgttttgccagatagcggacctggccaatgaagacact
ccccagctatatgtggcctgtggtaggggcccgcggtcatctctgagagtgttaaggcat
ggacttgaggtatcagaaatggctgtctcagagctacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacactggtgttgtccatcggagagactgtagaagaagtgactgattctgggtttctg
ggcactacccctaccttgtcctgctccttgttaggagacgatgctttggtgcaggtatat
cctgatgggattcggcacatccgagcagacaagcgagtcaatgagtggaagactcctggg
aagaaaacaattgtgaaatgtgcggtgaaccagcgacaagtggtgatcgccctaacagga
ggagagctggtctattttgaaatggatccctcaggacagctgaacgagtacacggagcgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccccctggagagcag
cggtctcgcttcctggctgtggggctggtggacaacactgtcaggatcatctccttggac
ccctcagactgtttgcagcctttgagcatgcaggctctcccggcccagcctgagtcctta
tgtattgtggagatgggtgggactgagaagcaggatgaactgggggagagaggttctatt
ggcttcttgtacctgaatattggactccagaacggtgtgttgctgagaactgtcctggac
cctgtcactggggacctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaggcagtgctggccatgtcaagccgctcatgg
ttgagctattcttaccagtctcgtttccatctcactcccctgtcttatgagaccctggaa
tttgcctctggcttcgcctctgaacagtgccctgagggcattgtggccatctccaccaat
accctgaggattttggcgctggagaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgttatccaccctgaaagtaacaaccttatcatcatt
gagactgaccacaatgcctacactgaggccactaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaggatgagcgagagctggccgcagagatggcagca
gcattcctcaatgaaaacctccccgagtccatttttggggctcctaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacattggaccttgtc
cagctggaacagaatgaagccgcttttagcgtggctgtgtgcaggttctccaacactggc
gatgactggtatgtgctggtgggcgtggccaaagacctgatactgaacccccgatctgtc
gctgggggctttgtctatacatacaagctcgtgaacaatggggaaaagctggagtttttg
cacaagactccagtggaagaggtccctgctgctattgccccattccaagggagagtgttg
attggtgtgggaaaacttctgcgagtctatgatctcggaaagaagaagttactccgcaag
tgtgagaacaagcatatcgccaactacatctctgggatccagacaattggacacagggta
attgtatctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccag
ctcatcatctttgctgatgatacctacccccgatgggtgaccacagctagtctccttgac
tatgatactgtggctggggcagacaagtttggcaacatttgtgtggtgcggctcccaccc
aacaccaatgatgaagtggacgaggatcccactggaaacaaagccctgtgggaccggggc
ttgctcaacggggcctctcagaaggcagaagtgataatgaactatcatgtgggcgaaaca
gtactttccttacagaagaccacgctgatccctggaggctcagaatcgcttgtctacacc
actttgtcaggaggcattggcatccttgtcccattcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtccgagcacccccctctctgtgggcgagaccac
ctcagctttcgttcctactatttccctgttaagaatgtgattgatggagatctctgtgaa
cagttcaactccatggagcccaacaaacaaaagaatgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggactcgctatgccttctga
DBGET
integrated database retrieval system
