Odocoileus virginianus (white-tailed deer): 110139097
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Entry
110139097 CDS
T10722
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ovr03037
]
110139097 (RP1L1)
04812 Cytoskeleton proteins [BR:
ovr04812
]
110139097 (RP1L1)
Cilium and associated proteins [BR:
ovr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110139097 (RP1L1)
Cytoskeleton proteins [BR:
ovr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110139097 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
110139097
NCBI-ProteinID:
XP_070336282
LinkDB
All DBs
Position
18:complement(46574707..46584099)
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AA seq
2289 aa
AA seq
DB search
MNSTPRDAPGPGHRECLLPSVARTPSVTQVTPAKKITFLKRGDPQFAGVRLAVHQRAFRS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSALEQLQDGGCYLCSDKKPPRTPGGLGQPR
GRSHSTQQLREFEAPGTASTCKGLKASRRITLVKNGDPQLQQTVVLSHRNTRSLTAFLSK
ASDLLRFPVKHVYTTSGKRLDSLKALLRSPSMLVCAGLEPFRPLAMEDIRRKGSEPSSGQ
TSRNKSGSWGPKAKQSVIHARSRLENRPRQFSLMSERSGLSDPSSPRRACMCPAPDRHPL
NTPARLGPLVAGEDIEKNVSMNEDGSLSVEMKVRFHLLGEDRLLWSRRLGGASTLTVTCG
EGPDAGEEDLLGCVWKGHPGDPSEPGSQGLGPCEVGGVGAFDKGQRQPGSRYEIWMNPLY
TSQGEWSASQWRSGLTQNSHSRAPRSQRVTSRRRGSKDRASPASSDRPPGGSESNSSCCS
GSLEDAVASCGPHLASGAGEGRGEGAALGRRDHDGCLKPRTGGLTHALPDSSASAGSHEE
CSERDKPSQGRPSKTSRGATQQGVPGSPTVNPSSIGNEDPQAEEIGQGVGHPQARNRSRL
RPRSARGPADSGDDAGGYTPSSALASALGRSRKQESRASTLSSPSTSVLSRGAQRARPRQ
QHNPKDIHCPLDPPVSRPTPRPSSGDRAHPHGPPPSLSESPQGTWNRASCDPGPPFSASR
YSPDTRGLSSIPITPGSNSDCVSNFYLPDSPSAETEGGPEFRPCSPAPTPSDTSGPFSAP
ADGLGEKTGGDRFQPSRPLVLPAGWPEGGRLGAHGGRSCSHLGTALARGSSCGTMRPQGG
QGPSSKACWVCSQYCPTPPRTRPSGKRHPSGCRSEGDRSADGEPCGDKAGEEKLDARHPR
APGSQGVASGRAVRAVRRGSPRSGPQLGRMVQGKLSGGGGGLEEREEGGSELLGALPRAS
PEAVVRAWLSNIPEEPTKHELEDKGEDVAGHGLEGPQEDPVGKHSPDAPERSAWAGQLPL
EQAASEEAEPEEVFPVASRASPKSADGLPCRGVSETPPEAGTSKGVAVDGGRGQRVIPSR
VSTSLQIMKVLMGSRPGRPSSLPEVSHSEGRRLSRSAQALITCLARLHFFDDDGLGSPTS
KVRFTDSPRFQELLSTFQALWPGSGLRNSELESDLRELGWRQALPALGPQVATEDFRPTS
SSGVDVGSGSGGSGEGSGPCTVDCSLVSEKMEPPLSISCQGPDSRTSGNPAVPGNRPLSS
YEAEGAASEDGAEKNGREQTLGGELDQGDKNTVEEEGVQLEEIKEGKERVELQVEGVRGF
PEEEGIMELELLGAGSQDGAGVWENKSLHEEEPGDPTAVATQSSSGRRGSPTEPPRSLSE
RCLDASGSQSGPKAEPPLEKLLGAAETGCGQTLDKLTQGAVERGTCKARRGSLISDPVWV
SKLLKKMEQTFMDHLAAATAELCTRWGLQGDPLLDQMVAELQRDVSQRLQDSMEKELLKV
QSWAGGAGAGPPREALRWEASLQTEQRRRRLQALRNLSPFSEQTRGRWPPSFSLEDLPVF
RGALGSQLGVEGKGEEFCPCEACVRKKMAPAPPVDAVGSASAPIRKAFDLQHILQKKKGG
CGDGEVAPTVEREAELLHRDPSRSGTARGADGDPELGSGQGPGAEEGDPWGTEEEAGAQE
KEGQTEPCVGSDPWEGLGRGEKGMGGEEGELEAGCGAEDTGEAHALGGDGPGPGEQDADA
GTTDTQEAAREKGSETGGGYGGDEEGSPQKGSEDEPWDRCMRSIEDQATDIPDPERKVTG
MYPESSTSEQEVAPSSSRTPDQGTEEEQEGEEGPAPEEGEEGPAPEQETEEGPAPEEGEE
GPAPEEGEEGPAPEQETEEGPAPEQETEEGPAPEQEGEEGPAPEEGEEGPAPEQEGEEGP
APEEGEEGPAPEQETEEGPAPEQEGEEGPAPEEGEEGPAPEQETEEGPAPEQEGEEGPAP
EEGEEGPAPEQETEEGPAPEEGEEGPAPEEGEEAPAPEQETEEVPAPEEGEEGPAPEQET
EEGPASEQETEEGPAPEEGEEGQAPEQEGEEGPAPEEGEEGQAPEEGEEGPAPEQETEEG
PAPEEGEEGPAPEQETEEGPAPEEGEEGPAPEQETEEGPAPEQETEEGPAPEEGEEGSAP
EQETEEGPAPEQETEEGPAPEQEGEEGPAPEEGEEGPAPEQETEEGPAPEEGEEGPASEQ
GTEEGLAPEEGEEGPASEQGTEEGGEQETKEGSDLEAKKVVKHLASTEMRFRNLPMDQTD
GFDQDDLDF
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtactccgagggacgccccgggccccggccaccgcgagtgcctcctgccttct
gtggcccggaccccctctgtcacccaggtcacgccggccaagaagataaccttcctcaag
cgaggggatccccagtttgctggggtccgcctggctgttcaccagcgcgccttcaggagc
tttggggccctgatggacgagctctctcagcgggtaccgctctcttttggggtgcggtcg
gtcaccacaccccggggcctgcacggcctcagcgctctggagcagctgcaggatggtggc
tgctatctctgctccgataagaagccccccagaacccctggcgggctgggccagccccgg
gggagaagccattccactcagcagttgagggaattcgaggcaccaggaacagcctctacc
tgcaaaggtctcaaagcctccaggaggatcacgctggttaagaatggggaccctcagctc
cagcagacagtggtgctcagccacagaaacaccaggagcctgacggcctttctcagcaaa
gcgtcggacctactgcgctttcccgtgaagcacgtgtacacgaccagtgggaaaaggctg
gactctctgaaggctctgctgcgaagcccctccatgctggtgtgcgccggtcttgagccc
ttcaggcctctggcgatggaagatatcagaagaaaaggaagtgaaccttcatctggacag
acttcaaggaacaaaagtgggagctgggggcccaaggccaaacagagtgtgatccacgca
cggtccaggctggagaacaggccacggcagttctccctgatgtcggagaggtcggggctc
agcgacccctcaagcccacgtcgagcctgcatgtgccctgcccccgacaggcaccctctg
aacactcctgcccggctcggccccttggtggcaggtgaagacatcgagaagaacgtgagc
atgaatgaggatggcagcctatcagtagagatgaaagtccgcttccacctgctgggggag
gaccggcttctgtggtccaggaggctcgggggggccagcaccctcaccgtgacctgtggg
gagggccccgatgctggggaggaggatctccttggctgtgtgtggaagggccaccctggg
gacccctcagagcctggttcacagggactggggccctgcgaggtgggaggggtgggagcc
tttgacaaaggccagcggcagccagggtccagatacgagatctggatgaaccccctgtat
acctcccagggagagtggtcggcctctcagtggaggtcggggctgacccagaactcccac
tccagggcccccaggagccaaagggtcaccagcaggagaagagggagcaaggacagggcc
agccctgcctccagtgacagaccccctggaggctctgagtcaaactcctcctgctgctct
gggtccctggaggatgctgtggccagctgtggtccacatctagcctcaggggctggtgaa
ggcagaggtgagggagcagcgctgggccgcagggaccatgatggttgcctgaaacccagg
accggtggcctgacacatgctcttcctgactcctccgcgagcgccgggtctcacgaggag
tgcagcgaaagggacaaaccgtcccagggccgccccagcaagacttcccggggggccacc
cagcagggagttccgggttcccccactgtgaacccctcatctatagggaacgaggaccca
caggcagaggagatcggacagggagtggggcacccccaggccagaaataggtctaggttg
aggccacgctcggctcggggcccggctgattctggggatgatgctggaggctacacccca
tcttctgcccttgcctcagccctgggcaggagcagaaagcaggagagcagagccagcacc
ctgtcctcacccagcacttctgtcctcagccgaggggcccagagggcccgccccaggcag
cagcacaacccaaaggacatccactgcccgctcgaccctcctgtgtcccggccaacgcca
cggccgtccagcggagacagggcccacccacacggccccccgcccagcctttctgaaagc
ccacagggcacctggaaccgggcctcctgcgacccagggccacccttctcggcctctcgt
tattccccggacacacgtgggctaagcagcatccccattacccctgggagcaattctgac
tgtgtttccaatttctacctccccgattccccctctgctgagaccgaagggggccctgag
ttcaggccgtgctcaccggctcccacaccttcagacacatctggcccgttcagtgcccca
gctgatggcctgggtgaaaagactgggggtgacagattccagccttcccggcccttggtc
ctgccagccgggtggcctgagggagggaggctgggagcacacgggggccgcagctgttca
cacctgggtacagccctggctcgggggtcctcctgtgggacgatgcggccacagggcggc
cagggcccctcctccaaggcctgctgggtgtgcagccagtactgtcccacgccccccagg
acacggccctcaggcaagaggcatccttcaggctgccgcagcgagggtgaccgcagcgct
gatggggagccttgtggggacaaggcgggggaggaaaagttggatgcgcggcatccgcgg
gcccctggctctcagggagtggcctcggggagagcagtcagagctgtgagaaggggcagc
cctcgcagcggtccccagctcgggagaatggtccaggggaagctctcaggcggaggagga
ggcctggaggagcgagaggaaggtggcagcgagctgctgggagctctgccccgagcctcc
ccggaagccgtggtccgtgcgtggctgagcaacatcccggaggagcccacgaaacacgag
ctggaggacaagggcgaggatgtggccgggcatggcctggaaggccctcaagaggatcct
gtgggcaaacattccccagatgccccggagagatcagcttgggccggacaactgcccctg
gaacaggcagccagtgaggaagcagaaccagaggaagtctttccagtggctagccgtgct
agtcccaagtcagcagacggcctgccttgccgtggagtgtcagaaacccctccggaggct
ggaaccagcaaaggagtggctgtggacggtgggaggggccagcgcgtgattcccagcagg
gtctccacctccttgcagatcatgaaggtgctgatggggtcccggccgggccggcccagc
agtctgcctgaagtgtcccactcagagggcaggaggctcagccgctcggcccaggccctc
atcacctgtctcgccagactccacttctttgatgatgatggtcttgggtctcccactagc
aaagtgaggttcacagactcccctcggttccaggagctcctaagtaccttccaggcccta
tggccagggagtggcctcaggaacagtgagctggaatcggacctccgggagcttggctgg
cgccaggccctgccggccctcgggccccaagttgcaactgaggacttcaggcccacgtcc
tcctctggggtggatgtcggcagtggctctggaggctcgggggagggcagcggaccctgc
accgtggactgcagcctggtgtccgagaagatggagccgcccttgagcatctcctgccag
gggcctgattccagaacctcggggaacccggcagttccaggaaaccgaccgctgagtagt
tatgaggcagagggtgctgccagtgaggacggggcagaaaaaaatggcagggagcagacg
ctgggtggtgagctggaccaaggagataaaaacacagtggaggaagagggggtacaatta
gaggaaataaaagaaggaaaagaaagagtagaactgcaagtagagggtgtcagagggttt
ccggaagaggaaggaatcatggaactagaattgttgggggcaggctctcaagatggggct
ggtgtctgggaaaataagagcctgcatgaagaagagccaggagaccccactgccgttgcc
acgcagagctcatcagggaggagagggagcccgacagagccccccaggagcctcagcgag
agatgcctggacgccagtgggagtcaaagtggccccaaagctgagccccctttggagaag
ttgctcggagcagctgagactggctgtgggcaaaccctggacaagctcacccagggggct
gtcgagaggggcacttgcaaggcccgcagggggtctctgatctctgaccccgtgtgggtg
tccaagttgctgaagaagatggagcagaccttcatggaccaccttgctgctgccacggcc
gagctctgcacccgctggggcctgcagggtgaccccctgctggatcagatggtggccgag
ctgcagcgggacgtgagccagcggctccaggacagcatggagaaggagcttctcaaggtc
cagagctgggcagggggcgcgggcgctgggccgcccagggaagccctccgctgggaggcg
tccctgcagacggagcagcgcaggcggcgcctccaggccctgcgcaacctctctcccttc
tccgagcagactcggggccggtggcccccctccttctccctggaggacctgccggtcttc
agaggagccctggggtcccaacttggggtagagggcaagggggaggagttctgtccctgc
gaggcctgcgtgaggaagaaaatggctcctgcacccccagtggatgccgtggggtcagcc
agcgcgcccatcagaaaggccttcgacctgcaacacattctgcagaagaagaaaggaggg
tgtggcgacggggaggtggcccccactgtggagagggaggcggagctccttcacagggac
ccttcgaggtcaggcactgcccggggagctgatggagaccctgagttgggatcaggccag
ggccctggagcagaggagggggacccctgggggaccgaggaggaggcgggtgctcaggag
aaggaggggcaaacagagccttgtgtgggcagcgacccctgggaggggctggggaggggg
gagaagggtatgggtggtgaggaaggagagctggaggcaggctgtggggctgaggacact
ggagaggctcatgccctgggaggagatggcccaggcccaggagaacaagatgctgatgct
ggaacaacagacacccaggaggctgcaagggagaaggggtccgaaacaggaggaggatat
ggaggggacgaagaagggagccctcagaaaggctccgaagatgagccgtgggacagatgc
atgaggagcattgaagaccaggccacggacatccctgatccagaaagaaaagtcacaggc
atgtatccagaaagctccacttctgagcaagaagtggccccatcaagttccagaactcca
gaccaagggacagaggaagagcaggagggagaggagggcccagctccagaagaaggagag
gagggcccggctccagagcaggagacagaggagggcccggctccagaagagggagaggag
ggcccagctccagaagagggagaggagggcccggctccagagcaggagacagaggagggc
ccggctccagagcaggagacagaggagggcccggctccagagcaggagggagaggagggc
ccggctccagaagagggagaggagggcccggctccagagcaggagggagaggagggcccg
gctccagaagagggagaggagggcccggctccagagcaggagacagaggagggcccggct
ccagagcaggagggagaggagggcccggctccagaagagggagaggagggcccagctcca
gagcaggagacagaggagggcccggctccagagcaggagggagaggagggcccggctcca
gaagagggagaggagggcccggctccagagcaggagacagaggagggcccggctccagaa
gagggagaggagggcccagctccagaagagggagaggaggccccggctccagagcaggag
acagaggaggtcccggctccagaagagggagaggagggcccagctccagagcaggagaca
gaggagggcccggcttcagagcaggagacagaggagggcccagctccagaagagggagag
gagggccaagctccagagcaggagggagaggagggcccagctccagaagagggagaggag
ggccaagctccagaagagggagaggagggcccggctccagagcaggagacagaggagggc
ccggctccagaagagggagaggagggcccagctccagagcaggagacagaggagggcccg
gctccagaagagggagaggagggcccagctccagagcaggagacagaggagggcccggct
ccagagcaggagacagaggagggcccggctccagaagagggagaggaaggctcggctcca
gagcaggagacagaggagggcccggctccagagcaggagacagaggagggcccggctcca
gagcaggagggagaggagggcccggctccagaagagggagaggagggcccggctccagag
caggagacagaggagggcccggctccagaagagggagaggagggcccagcttcagagcaa
gggacagaggagggcctggctccagaagagggagaggagggcccagcttcagagcaaggg
acagaggaaggaggagagcaggagacaaaggaaggctctgacttagaagccaaaaaagta
gtgaaacatctggcttccacagaaatgaggtttagaaacctccccatggaccagacagat
ggctttgaccaagatgacttagatttctag
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integrated database retrieval system
