Odocoileus virginianus (white-tailed deer): 110139644
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Entry
110139644 CDS
T10722
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110139644 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110139644 (CADM1)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
Nectin family
110139644 (CADM1)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
C1-set
Ig_C17orf99
Mucin
Syndecan
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
110139644
NCBI-ProteinID:
XP_020753293
UniProt:
A0A6J0XVN4
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Position
10:49861383..50204374
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AA seq
472 aa
AA seq
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MASAVLPSGPQCAAAAAAAAAAAPPGLRLRLLLLLLSAAALIPTGDGQNLFTKDVTVIEG
EVATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSIS
DEGRYFCQLYTDPPQESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTI
RWFKGNKELKGKSEVEEWSDMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYL
EVQYKPQVHIQMTYPLQGLTREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPN
LFINNLNKTDNGTYRCEASNIVGKAHSDYMLYVYDPPTTIPPPTTTSTTTTTTTILTIIT
DTTATTEPAVHGLTQLPNSAEELDSEDLSDSRAGEEGAIRAVDHAVIGGVVAVVVFAMLC
LLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgctgtgctgccgagcggaccccagtgtgcggcggcggcggcggcggcggcg
gcggcggcgcctcccgggctccggcttcggcttctgctgttgctcctctctgccgcggca
ctgatccccacaggcgatggacagaatttgtttacgaaagacgtgacagtgattgaagga
gaagttgcaaccatcagctgccaagtcaataagagtgacgactctgttattcaactactg
aatcccaacagacagaccatttatttcagggacttccggcctctgaaggacagcaggttc
cagctgctgaatttttcgagcagtgaactgaaagtgtcgctgacaaatgtctccatttct
gatgaaggaagatacttctgccagctctacactgaccccccgcaggaaagttacaccaca
atcacagtcctggtcccaccacgtaatctgatgatcgatatccagaaagacactgcggtg
gaaggcgaggagattgaagtcaactgcaccgccatggccagcaagccagccacgaccatc
cggtggttcaaagggaacaaggagctcaaaggcaaatcagaggtggaggagtggtcagac
atgtacactgtgacaagccaactgatgctgaaggtgcacaaggaggatgacggggttcca
gtgatttgtcaggtggagcatcctgctgtcaccggaaacttgcagacccagcggtacctg
gaagtacagtataagcctcaagtgcatattcagatgacttaccctctacaaggcctaacc
cgggaaggggacgcgcttgagttaacatgtgaagccatcgggaagccccagcctgtgatg
gtgacttgggtgcgagtcgatgatgaaatgcctcaacatgccgtgctctcggggcccaac
ctgttcatcaataacctgaacaaaacagataacgggacctaccgctgtgaggcttccaac
atagtggggaaagctcattcggattatatgctgtatgtatacgatccccccacaactatc
cctcctcccacaacaacctccaccaccaccaccaccaccaccatcctcaccatcatcaca
gacaccacggcgacgacagaaccagcagttcacggccttactcagttgcccaattccgca
gaagaactggacagtgaggacctctcagattctcgagcaggtgaagaaggcgcgatcagg
gcggtggaccacgccgtgattggcggcgtcgtggccgtggtggtgtttgccatgctgtgt
ttgctcatcattctggggcgctattttgccagacataaaggtacatacttcactcatgaa
gccaaaggagccgatgacgcagcagacgcagacacagctataatcaatgcagaaggagga
cagaacaactctgaagaaaagaaagagtacttcatctag
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