Odocoileus virginianus (white-tailed deer): 110139767
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Entry
110139767 CDS
T10722
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03410
Base excision repair
ovr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110139767 (POLL)
03450 Non-homologous end-joining
110139767 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110139767 (POLL)
Enzymes [BR:
ovr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110139767 (POLL)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110139767 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
110139767 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
NTP_transf_2
BRCT_2
HHH_5
PTCB-BRCT
BRCT
Motif
Other DBs
NCBI-GeneID:
110139767
NCBI-ProteinID:
XP_020753465
UniProt:
A0A6J0XW39
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Position
7:complement(5535980..5544512)
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AA seq
634 aa
AA seq
DB search
MATVPPRVTSGWPGRCSGLWPVPTPRTPGPPSALIGCSERLGSSHTSMEPRGILKAFPKR
KKVHTNPSSKALAKIPKTEDRVEAGEWLSSVRVHVVPTGIGRARAELFEKQIVQHGGQIC
PAQAPGVTHIVVDEGMDCERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDTAGFGIF
TPKRYLDEAQLSKADQLSFTPPGAGEAQPRTALSPSRPPTRPISPAWRAEAVASIQAQTS
SDGETSDGEETQVSGADLEALISGRYPNPFEGDGEPSPAPKGLDKWVCAQPSSQKAINHN
PHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAFGIPGIGKRMAEKI
VEILESGHLRKLDHINESVPVLELFSNIWGAGTKTAQMWYHQVTPCPSPYFSFTGFRSLE
DIQNQACLTTQQAIGLKHYDDFLDRMPREEAAEIEQTVREAAQAFNPGLLCVACGSYRRG
KATCGDVDVLLTHPDGRSHQGIFSCLLDSLRQQGFLTDDLVSHEENGQQQKYLGVCQLPG
PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNAQ
GHKVGSGQVLPTPTEKDVFRILGLPYREPAERDW
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgtcccgcctagggtcacttccggatggcccggaagatgttctgggctttgg
cctgttcccaccccgcgaaccccgggccctccgtctgctctcattggctgctcagaaagg
ttaggatccagccatacctcaatggagcccaggggcatcttgaaggcatttcccaagcgg
aagaaagttcacaccaacccatcatcaaaagctcttgcaaagattcctaagacggaagac
agagtagaagcaggagagtggctgagctccgtgcgggtgcacgttgtgcccaccggcatt
gggagagcccgggcagaactctttgagaagcagattgtccagcatggtggccagatatgc
cctgctcaggccccaggggtcactcacattgtggtggatgaaggcatggattgtgagcga
gccctccgcctccttagactgccccagctgcccccaggtgctcagctggtgaagtcagcc
tggctgagcttgtgcctgcaggagagaaggctggtggacacagcaggattcggcatcttc
acccccaagaggtacctggatgaagcacagctcagcaaggcagaccaactctcttttaca
cctcctggagccggtgaggctcagcccaggacagccctgtctccttcccgacctcccacc
agacctatatctcctgcctggagggcagaggcagttgcaagcatccaagcccagaccagc
tctgatggtgaaaccagtgatggggaagagacccaagttagcggtgctgatctggaagcc
ctgatcagcggccgctaccccaacccctttgagggagatggtgagcctagcccagccccc
aagggcctggataagtgggtctgtgcacagccttcgagccagaaggcaatcaaccacaac
ccccatatcacagagaagctggaagtattggccaaagcctacagtgttcagggagacaag
tggagggccctgggctatgccaaggccatcaatgccctgaagagcttccacaagcctgtc
acctcctaccaggaggcctttggcatccctgggattggaaagcggatggctgagaagatt
gtcgagatcctggagagtgggcatctgcggaagctggaccacatcaatgaaagcgtgcct
gtcttagagctcttctccaacatctggggagctggaaccaagactgcccagatgtggtac
catcaggtcacaccctgtcctagcccctacttcagttttacgggtttccggagcttagaa
gacatccaaaaccaggcctgtctgactacccagcaggccattggcctgaagcattatgat
gacttcctagaccgcatgcccagggaggaggctgcagagattgagcagacagtccgggaa
gcagctcaggccttcaaccccgggctgctgtgcgtggcatgtggttcataccgacgggga
aaggcaacctgtggtgatgtggacgtgctgctcacccacccggatggccgctctcaccag
ggcatcttcagctgcctcttggacagcctccggcagcaagggttcctgacggatgacctg
gtgagccacgaggagaatggccagcagcagaagtacctgggtgtgtgccagctcccgggg
ccagggcggcggcaccgacgactggacatcatcgtcgttccctacagcgagttcgcttgt
gccctgctctacttcaccggctctgcccacttcaaccgctccatgcgggctctggccaag
accaagggcatgagcttgtcagagcatgccctcagcacagctgtggtccgcaatgcccaa
ggccacaaggtgggctctggccaagtgctgcccacccccactgagaaggatgtgttcagg
atcttaggcctgccctaccgagaacccgctgagcgggactggtga
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