Odocoileus virginianus (white-tailed deer): 110139834
Help
Entry
110139834 CDS
T10722
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X2
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110139834 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110139834
NCBI-ProteinID:
XP_020753607
UniProt:
A0A6J0XWU3
LinkDB
All DBs
Position
26:complement(10165305..10253356)
Genome browser
AA seq
1982 aa
AA seq
DB search
MEFPFGSLETPNFRRFTPESLVEIEKRIAAEQEAKKAKEKFRKQKDQKDKPRPQLDLKAC
NQLPKFYGTLPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSIHSYPLWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYAGEVTDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCTAVNETANYSSHEKREW
NYCHGDQDYYTNKEGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKYQETLEILRAEQEVLAALGVDTASLQSHNGSPLASKTANERKHRMKSRVSE
GSTDDNKSLRSESYNQHRMSFLGLTAGRRRASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DHESHHGSLLMLRGAGQQGPLPRSPLPQTLNRGSVHGEDGAPKMTTGELAPGVIEVPVFD
AGQKTFLTADYLNEPFRVQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCP
TWVKLKTLLFAIVMDPFAELTITLCIVVNTVFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIALDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYCQKRKKISAPNEDWPR
WHMYDFFHSFLVVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSADNLTPPEDDGEVNNLQVALARIQVFGQHTKRALCSFLSRPCLLPWSKAEPQLVV
KLPLSTSIAKNHIAADTALGSPGRLPALRSPRDDHGDFITDPNIWVSVPIAEGESDLDDL
EENDEEDAQSTGQEVIPQRQEQLQHVGKYEDHLPCRSPGSGISSEDLTPHLGEKWKDQAP
AQSPAKGADDTSSSEGSTVDFLDPEEILRKIPELADDLDEPDDCFTEGCVHHCPCCRVNS
SRFPWATGWQVRKACFRIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYTD
RVFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKMLQYSDMASIKALR
TLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKC
INKTNEGFLLVPWSTVNNMSDCERQNHTGSLFWVNVKVNFDNVAMGYLALLQVATFKGWM
DIMYAAVDSRDVNFQPKWEDNVYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLNM
ITMMVETDEQSEEKTKVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFVVVVLS
IGSLVFSAIVTSLGSLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYSIFGMASFASVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPI
LNTGPPYCDPNLIINNSTRGDCGNPIVGILFFTTYIIISFLIVVNMYIAVILENFNVATE
ESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNVLIQMDL
PLVPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQ
EDISATVIQKAYRSYMRHRSRTIASPAGVPRAEEEAASLSNEGFAVLIANENCVLPDKSE
TASTTSFPPSYDSVTRGLSDQVNLSTSSSMQNEGEAVSKEATGPSCGPSSMGMSSSDVST
AL
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactcccaacttccgtcgattcaccccggagtcc
ctggtggagattgaaaaaagaattgctgctgagcaagaggcaaagaaagccaaagagaag
ttcaggaagcagaaggaccagaaagacaagcctcggccccagctagacttgaaagcctgc
aaccagttacccaagttctatggtacactcccggcagagctgattggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccatccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaactgtgtgggcatgacccaaacagagcttccagagagaatggaa
tatgtcttcactgtcatttatacctttgaagccttgataaagatattggcaagaggattt
tgtctaaatgagttcacttacctgagagatccttggaactggctggattttagtgtcatc
actctggcctacgctggtgaagtgacagatctccgagggatctcaggcctgcggacgttt
agagtccttagagctttaaaaaccgtgtctgtgatcccgggactgaaggtcatcgtgggg
gccctgatccactcggtgaagaagctggctgatgtgaccattctcactgtcttctgcctg
agtgtctttgccctggtgggcctgcaactcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagctgtcaatgagacagccaattactcctctcacgaaaaacgggagtgg
aattactgccatggggaccaagattactataccaacaaagaaggcacttctgacccctta
ctctgtggcaatggatctgatgcaggccactgccctgaaggttatttctgccttaagaca
tctgacaacccagattttaactataccagctttgattccttcgcttgggcttttctctca
ctgtttcgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctggaaaaatctatatgatttttttcgtgcttgttatcttcctggggtctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagtaccaggagacccttgagatactccgggcagag
caggaggttctggcagcactgggggttgacacagcctctctccagtctcacaatggatcc
cccttggcctccaaaactgccaatgaaagaaaacacagaatgaagtcaagggtgtcagag
ggctccacagacgacaataagtcactccggtctgagtcttacaaccagcaccgaatgtct
ttcctaggcctcaccgctgggagacgccgggctagccatggcagtgtgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gaccatgaaagccatcatggctccctgctgatgcttaggggtgcaggccagcaaggcccc
ctccctaggagtccactgcctcaaaccctcaaccgtggctcagtgcatggagaagatgga
gctcccaaaatgaccactggagagcttgcccctggagtcatcgaagtcccggtgtttgat
gcaggtcagaagactttcctaacagcagactacttgaatgaacctttccgagtccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggaacttgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcagaagtatcttatctgggattgctgccca
acatgggtgaagctcaagacgcttctcttcgcaattgtgatggacccctttgcagagctc
accatcaccctgtgcatcgtggtgaacaccgtcttcatggccatggagcactatggcatg
agccccgccttcgaagccatgctccagatcggcaacattgtatttactgtgttttttact
gctgaaatggtcttcaaaatcatagccttggacccatactattacttccagaagaagtgg
aacatatttgactgcatcatcgtcaccgtgagcctgatagagctgggcgcggcccggaag
gggagcctgacagtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtcc
tggccaaccttaaacacgctcatcaaaatcatcggtaactcggtcggggccctggggaac
ctgaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctg
ggggataactactgccaaaagcggaaaaaaatttcggcgcccaatgaagattggccacgc
tggcacatgtacgacttcttccactccttcctcgttgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagttggccagaagtctatctgcctcatcctt
ttcttgacagtgatggtgctgggcaacctggtggtgcttaacctgttcatcgccctgctg
ctgaactccttcagtgccgacaacctcacgccacctgaggacgacggtgaggtgaacaac
ctgcaggtggccttagcgaggatccaagtgtttggccagcacaccaagagggctctttgc
agtttcctcagccggccctgcttgctcccctggtccaaggcagagccccagttggtggtg
aaactcccactttccacctccatagccaagaaccacattgctgctgatacagccctgggg
agccccggacggctcccagctctcagaagccccagggatgaccacggtgacttcatcact
gatcctaacatatgggtctctgtgcctattgctgagggtgaatctgacctggatgacttg
gaggagaacgatgaggaggatgctcagagcaccgggcaggaagtgatcccccaaaggcag
gagcagctgcagcacgttgggaagtatgaggatcacctgccatgcaggagcccagggtct
ggaatatcctctgaggacctgactccacacctaggtgagaagtggaaagaccaggctcct
gctcagagccctgcaaagggagcagacgacacgagctcctccgaaggcagcactgtggac
ttcctggaccccgaggagatcctgaggaagatccctgagctggcagacgacctcgatgag
ccagacgactgtttcacggaaggctgtgttcaccactgtccctgttgcagagtgaacagc
tccaggtttccatgggccacaggctggcaggtacgcaaggcctgctttcgcatcgtggag
cacagctggtttgaaagtttcattgtcttcatgatcctgctcagcagtggagcgctggcc
tttgaagatttttaccttgaccagaagcccacggtgaaggccttactggagtacactgac
agggtgttcacatttatctttgtgtttgagatgctgctcaaatgggtggcctacggcttt
aagaattacttcaccaatgcctggtgctggctggacttcctgatcgtgaacatctcactg
acaagcctcatagcgaagatgctgcagtactctgacatggcgtccatcaaagcccttcgg
accctccgcgccctgcggccactgcgggctctgtctcggtttgaaggcatgcgggtggtg
gtagatgccctggtgggtgccatcccatccatcatgaatgtcctgctcgtctgcctcatt
ttctggctcatcttcagcatcatgggtgtgaacctcttcgcggggaagtttcagaaatgc
atcaacaagaccaatgaaggctttcttcttgtgccttggtctactgtgaataacatgtct
gactgtgaacgtcaaaaccacactggaagcttattttgggtcaatgtaaaggtcaacttt
gataacgttgcaatgggctacctcgcgcttctgcaggtggcaacctttaaaggctggatg
gacatcatgtatgcggctgtcgattcccgggatgtgaactttcagcccaagtgggaggac
aacgtgtacatgtacttttactttgtcatcttcatcattttcggcggcttcttcacactc
aatctatttgttggcgtcatcattgacaacttcaaccaacagaaaaaaaagttaggaggc
caggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaagctgggc
tccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggttttgtcttt
gacatcgtgaccaggcagacttttgacattgttatcatggtcctcatctgcctcaacatg
atcaccatgatggtggagactgatgagcagagtgaagaaaagacaaaagtcctgaacaaa
atcaaccagttctttgtggccgtcttcacgggagagtgtgtcatgaagatgtttgccttg
aggcattactacttcaccaacggctggaatgtgtttgactttgtcgtagtggtcctctcc
attgggagcctggtgttctctgcgattgttacctcacttggaagtttattctccccgacg
cttttccgcgtcatccgcctggcccgcatcggccgcatcctcaggctgatccgcggggcc
aagggcatccgcacactgctcttcgccctcatgatgtccctgcctgccctcttcaacatc
gggctgctgctcttcctcgtcatgttcatctactccatctttggcatggccagctttgct
agcgtcaagtgggaggccggcatcgatgacatgttcaacttccagaccttcgccaacagc
atgctgtgcctcttccagatcaccacgtcggcgggctgggacgggctcctcagccccatc
ctcaacacggggcccccctactgcgaccccaacctgatcatcaacaacagcaccagaggg
gactgtgggaatcccatcgtgggcatcctcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgcagtgattctggagaacttcaacgtggccacggag
gagagcacggagcccctgagtgaggacgactttgacatgttctacgagacgtgggagaag
tttgacccagaggccactcagttcattaccttctctgccctctcagacttcgcagacacc
ctgtctggccccctgagaatcccaaaacccaatcggaatgtattaatccagatggacctg
cccttggtccctggagataagatccactgtttggacatcctgtttgctttcaccaagaat
gtcctgggagaatccggggagttggattccctgaaggcaaatatggaggagaaatttatg
gcaactaatctttcaaaagcatcctatgaaccaatagcaaccacccttcgatggaagcaa
gaagacatttcagccactgtcatccaaaaggcctatcggagctacatgcggcaccgctcc
aggacgattgccagccctgcaggggtacccagggctgaggaggaggcagcatcactctcc
aatgaaggctttgctgtgctcatagcaaatgaaaactgtgtgctcccagacaaatctgaa
actgcttccaccacatctttcccaccatcctacgacagtgtcactagaggccttagtgat
caagtcaacttgagcacatctagctcaatgcaaaatgaaggggaggctgtcagtaaagaa
gccactgggccctcatgtggaccctccagtatgggcatgtccagttcggatgtgtccact
gctctgtga
DBGET
integrated database retrieval system
