Odocoileus virginianus (white-tailed deer): 110139874
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Entry
110139874 CDS
T10722
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110139874 (NPAS1)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110139874 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
110139874
NCBI-ProteinID:
XP_020753667
UniProt:
A0A6J0XX03
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Position
20:complement(7746029..7764359)
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AA seq
587 aa
AA seq
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MAAPYPSGGGGGRGGSVPWDFLPGFVVKAPPGPCLQAQRKEKSRNAARSRRGKENLEFFE
LAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSSGPPAGLAPGRRGPV
ALVSEVFEQHLGGHILQSLDGFVFALNQDGKFLYISETVSIYLGLSQVELTGSSVFDYIH
PGDHSEVLEQLGLRAPTPGPPTPPSIPSSSSSSSSSSSLADTPEIEASPTEVSRSSRVQE
RSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAELPLHGHM
IVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDLLDKGQVM
TGYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGEQTPLDAFQLPASV
AREDASSPEPEPTEPEPPVEGKQTAPPEEDEAPQPQGKPIKVEPAPGETEDLEDSEDEEP
SGHLAPTRPEFTSVIRAGALKQDLVGPWGLAPPGDPPPSLLHTGFLPPVMRGLCAPGTIR
YGPAELGLVYPHLQRLGPGPALPEAFYPALGLPYPGALGTRVQRKGD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcggtggcgggggaggtcgaggcggcagcgtcccttgggac
tttctgccggggttcgtggtcaaggccccgcctggaccctgcctgcaggcgcagcgcaag
gaaaagtcccgtaacgctgcgcgctcgcggcgcggaaaggagaacctggagttcttcgag
ctggccaagctactgcctttgcccggagccatctccagccagctggacaaggcgtccatc
gtgcgtctcagcgtcacctacctccgcctgcgccgctttgctgccctcggggcgccgccc
tgggggctgaggtcttcggggccgccggcgggcctagccccaggccgcaggggtcccgtg
gcgctggtctccgaagtctttgagcagcacctgggcggacacatcctgcagtccctggac
ggcttcgtgtttgccttgaaccaggacgggaagtttctctacatctcagagaccgtctcc
atttatctgggcctctcacaggtggagctgacgggcagcagtgtcttcgactacatccat
ccaggggaccactctgaggtgctggagcaactggggctgcgggccccgacccccgggccc
cccaccccgccttccatcccctcctcttcctcctcctcctcatcttcctcttcgcttgcg
gatacgcctgaaatcgaggccagccccaccgaggtgtcccggtcctcccgggtccaggag
cgctccttcttcatccgcatgaaatccaccctcaccaagaggggtctgcatgtcaaggcc
tcgggatacaaggtcatccacgtgaccggccgccttcgggcccgcgccctgggcctcgtg
gccctcggccacacgttgccgccggctccgctggcggagctgccgctgcacggacacatg
atcgtcttccgactcagcctgggtctcaccatccttgcttgtgagagcagggtcagcgac
cacatggacctggggccctcggagctggtgggccgcagctgctaccagtttgtccatgga
caggatgcaaccaggatccgccaaagccacctggacctgctggacaagggccaggtgatg
accggttactaccgttggctgcagcgtgccgggggcttcgtgtggctgcagtccgtggcc
actgtggctgtgagtgggaagagccctggagagcgccatgtgctctgggtcagctatgtg
ctcagccaagctgagggggagcagacacctctggatgccttccagcttccggccagtgtg
gcccgtgaggacgcgtccagcccggagccagagcccacagagccagagcctccagtggaa
ggaaagcagactgcccctcccgaggaggacgaggccccccagccccagggcaaacccatc
aaagtggagcccgcccccggggagacggaagacctggaggacagtgaggacgaggagccg
tcgggccacctggccccaacgaggcctgagttcacatccgtcatccgggcgggggccctg
aagcaggacttggtggggccctggggcctggcgcctcctggggaccccccgccttccctc
ctgcacaccggcttcctgcccccggtcatgcggggcctgtgtgcgccgggcaccatccgc
tacggccctgccgagctgggcctggtgtacccacacctgcagaggctgggcccgggcccc
gccctcccggaggccttctaccccgccctgggcctgccctaccccggggccctgggcacc
agggtgcagcggaagggggactga
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