Odocoileus virginianus (white-tailed deer): 110140540
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Entry
110140540 CDS
T10722
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110140540 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110140540 (CSTF3)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110140540 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
110140540
NCBI-ProteinID:
XP_020754687
UniProt:
A0A6J0XZX1
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All DBs
Position
10:25122544..25186564
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AA seq
717 aa
AA seq
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MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccttatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggtagaaaagctatttcagagatgccttatgaaggttttgcacattgactta
tggaagtgttatctttcatatgtccgagaaaccaagggtaaactaccaagttacaaagaa
aagatggctcaagcatatgacttcgcactggataaaattggaatggaaattatgtcttac
cagatttgggtggattacatcaacttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgttcgaagagtttatcaacgaggttgtgttaatccaatg
atcaatattgaacaactgtggagagactataataaatatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattacatgaatgctaggcgggtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcag
aatactcctcaagaagctcagcaggtggatatgtggaagaagtacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagaccctgataactaaaagagttatgtttgcttat
gaacagtgcctgctggtgctgggccatcaccctgatatttggtatgaagctgcccaatat
cttgagcaatctagtaaactgttagcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttactaaaaaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgatcccaccttggtatatatccaa
tatatgaaatttgcaagaagagctgaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaagaaatat
ggagacattccagagtatgtcctggcctatattgactatctttctcacctcaatgaggac
aataatactcgagttttgtttgaacgagttttaacatctggaagtcttcctcctgagaaa
tctggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatttagctagt
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtagacagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcacttgggtataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacaccctgtccctggtggagtgttcccagtaccacctgcagcagttgttttaatg
aaacttctccctcctcctatttgtttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatacagttgaagaagctgtgaggatcattact
ggaggagccccagagctagcagtagaaggcaatggcccagtggaaagtaatgcagtgctc
acgaaggccgtcaaaaggcccaacgaggattcagatgaagatgaggaaaagggagctgtg
gtcccccctgttcatgacatttacagagcgcggcagcagaagcggattcggtga
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