Odocoileus virginianus (white-tailed deer): 110141116
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Entry
110141116 CDS
T10722
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110141116 (SHPRH)
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110141116 (SHPRH)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110141116 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
PHD
zf-RING_2
zf-RING_5
SfNPV_sf27
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
110141116
NCBI-ProteinID:
XP_070317559
UniProt:
A0ABM4HPR0
LinkDB
All DBs
Position
34:19542965..19637702
Genome browser
AA seq
1685 aa
AA seq
DB search
MSSRRKRAPPVRVDEEKQQQLCWNMHEDRRNEPLTLTDDEQSCPGLDPSPAHRIILDDSL
KEEVAHREKRRCSEAVSISKPIDKEETGGIFSPLSVKLNIVISPYHFDNSWKAFLGEFTL
QLLPEQCLIENFSEKSFTLTSSELSNQFLIYVHSGCENVKNKERGLSEPVSICDKGIQVG
SSFSSEMLEDLGWLQKKKRIKLYQKPEENNIIKVGIYLLEAGLAKPDFLSDASSRMKKFN
QLMKRVMEKLYNFIIPDVLEEDEEGSDSEPEGQDIDELYHFVRQTHQQETRSIQVDVQHP
ALTPVLRPYQREAVNWMLQQEHFKSTPAGENTLHFLWREIVTSEGLKLYYNPYTGCIIRE
YPNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGEVVNYFIPSRYSG
GNIKKTETQNMEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQR
NRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIHDKTRKQAVGSPRKTQKES
RKSGNKDTDSEYLPSNTSDDDDDPYYYYCKPRRNRSKWRKKPALSTKREKSQLSISLSPQ
DHCPPTGNSEITDVTTSEGTCVFEVSQEHSAKDQAESLNPVGDDMPHSNIMGPCNSPDYR
FECICGELDQADCKPRVQCLKCRLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVSTRAT
LIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSE
LNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRL
SGINRWCISGTPVQRGLEDLFGLVVFLGVEPYCVKHWWVRLLYRPYCKKNPHFLYSFIAK
IMWRSAKKDVIDQIQIPPQTEETHWLHFSPVERHFYLRQHEVCCQDAVVKLRKISDWALR
LSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEE
AHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHATHNLMEL
LTAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALLPVQQTIRDLQRKIHSN
SPWWLNVIHRAIEFGIEEELAQRVRNEITSNYKQQTGKLSMSEKFHDCRGLQFLLTTHME
ELSKFQKQVREAVKNLEGPPSRHVIESATICHLRPVRLPLNCCVFCKADELFTEYESKLF
SHTVKGQTAIFEEMIEDEEGLVDDRITTTSRGLWAISETERSMKALLSFAKSHRFDVEFI
DEGSNSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPSPPVLH
IIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQ
LGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEVSYVFTSEKASQ
EEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQI
SRVKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRV
HRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNPSAKHSEASVLTVADLADLFTKD
TEDLE
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgacggaaacgtgctcccccagtgagggtagatgaggaaaagcaacagcag
ctttgctggaatatgcatgaggacagaaggaatgaacctctcaccttaactgatgacgag
cagtcctgcccaggtttggacccctctcctgctcaccgcatcatcctagatgacagtcta
aaggaagaagtggctcacagagaaaagaggagatgttccgaagccgtgagcatctcaaaa
ccaattgataaagaagagactggtggcattttttcccctttgtctgtaaaactgaatatt
gtaatttctccctatcactttgataattcttggaaagcatttctaggagaattcactctt
cagcttcttcctgaacagtgtttaattgaaaatttttctgaaaagagttttacactgaca
agttccgagctgagcaatcagttcctgatctatgttcattcaggatgtgaaaatgtaaag
aacaaagaaagaggactcagtgagccagtcagtatctgtgacaagggaattcaagtgggg
tcgtccttcagcagtgaaatgttagaagatttgggatggctgcaaaagaagaaaagaatc
aaactttaccaaaaaccagaagaaaataacattatcaaggttggaatttatcttttggaa
gctggcctagcaaaaccagattttctgagtgatgcaagttcaagaatgaaaaagttcaat
caactcatgaagagagtgatggaaaagctatacaattttattattccagatgtgttggaa
gaggatgaggaaggttccgatagtgagccagagggacaggacattgatgaactctatcac
tttgtgaggcagacacatcagcaagaaactcggtccatccaagtggatgtccagcatcct
gcgctgacccctgtgttgagaccgtaccaaagagaggctgtcaactggatgctacaacag
gagcatttcaaaagcacccctgctggtgaaaataccctgcactttctatggagagaaatt
gttacatctgagggtttgaaactctactacaatccatacacaggctgcatcattcgtgag
tacccaaatgctggaccacagttgcttggtgggatcttagcagatgagatgggtcttgga
aagacagtggaagttttggctctgattctgacacatactcgacaagatgtcaaacaagat
gctctcactcttcctgagggagaagtagtaaattatttcattccatcacgttattctggc
ggaaatataaaaaagacagagacccagaatatggaatttgaaccaaaagaaaaagttcag
tgcccccctacacgggtgatgatcctgacagctgttaaagaaatgaatggaaaaaaagga
gtttctattctttccatctacaaatatgtcagttctatatatagatatgatgttcagcgg
aacaggagtcttctgaaacggatgctcaaatgtttaatttttgaaggccttgtgaaacag
atcaaaggccatggtttttctggtacttttacactggggaagaattacaaagaagaggac
atacatgataaaacgagaaagcaggcagtcgggagtccaaggaaaactcagaaagaatcc
agaaaatcaggaaacaaggacacagactctgaatatttgccatcaaatacctctgatgat
gatgatgatccttactattattactgtaagcccaggagaaaccgtagtaagtggaggaag
aaacctgctctgtccacaaaaagggaaaaaagccagctgagcatcagtctcagcccacag
gatcactgcccacctaccggtaactctgaaattactgatgttaccacatctgaaggtaca
tgtgtctttgaagtcagtcaagaacattcagccaaggaccaagctgaatctctaaatcct
gttggtgatgacatgccacactctaatatcatgggtccctgtaattctcccgattatcgc
tttgagtgcatatgtggtgaacttgaccaggcagactgtaagcctcgtgttcagtgcctg
aaatgccgcttgtggcaacatgcaaaatgtgtgaattatgaggagaagaatctgaaggtt
aaacctttctactgcccccactgccttgttgcaatggagccagtatctacaagagcaact
ctgatcatctcccccagttccatctgtcatcagtgggtggatgaaatcaacaggcatgtg
aggtcatcatctcttcgagtcttggtatatcaaggagtgaagaaagatggttttttacag
cctcattttttggcagaacaggatatagtcatcattacttacgatgtcctccgttcagaa
ctgaactatgtagacatcccacacagcaacagtgaggatgggcgtcgcttaaggaaccag
aagcgctacatggctattcccagtcctcttgtagctgtggagtggtggagaatctgcctt
gatgaagctcagatggtcgaatgtcctgctgtaaaagctgcagaaatggctcagcgcttg
agtgggattaaccgctggtgcatcagtggcactccggtacagagaggattggaagatctt
ttcgggttagtggtatttctcggtgttgaaccttactgtgtcaaacactggtgggttcga
cttctctatcgtccttattgcaagaagaatcctcatttcctctacagctttattgccaag
ataatgtggaggtctgcaaagaaagatgtgattgaccaaatccagatacccccacagaca
gaagaaacccactggcttcacttttctccagtggaaagacacttctatctccgtcagcat
gaggtgtgctgccaggatgcagtggtaaaactcaggaagatttctgactgggctctgagg
ctcagcagcctggacagaaggactgtcacctccatcctgtatccgttgctgaggctccgg
caggcctgctgccacccacaggcagttcgtggcgagttcttgccactccaaaaaagcacc
atgacaatggaggagctgctgacgtccctgcagaagaagtgtggcactgaatgtgaagag
gcccatcggcagctagtctgtgccctcaatggcttagcaggcatccacatcattaaaggc
gagtatgctttggcagcagaactatacagagaagtgttgcgttcatctgaggaacacaaa
gaaaaactcaaaacggattccctgcaaagacttcatgctacccataacttgatggaattg
ttgacagccaagcacccagggatacctcctaccctcagagatggcagacttgaggaagag
gccaaacaactccgagagcattacatgagcaagtgtaacacagaggttgcagaagcccag
caggctttgttgcctgttcagcagactatccgtgatctccagagaaagattcattctaat
tctccttggtggctgaatgtgatacacagagcaatagaatttggtattgaagaggaactt
gctcaaagagtgcgaaatgaaataaccagcaactacaagcaacaaactggcaagctctct
atgtcagagaagttccatgactgccgaggacttcaattcttactgacaacacatatggaa
gagctcagtaagttccagaagcaagtgagagaggctgtaaaaaacctggagggacctcca
tctcggcatgttattgagtctgcaacaatctgccatctccgaccagtcagacttcctctc
aactgctgtgtcttttgtaaggctgatgaattgtttacagagtatgagtcgaaactattt
tctcacacagtcaaaggccagactgcaatatttgaggagatgatagaagatgaagaggga
ttggtggatgaccgaataactaccaccagtcgtggtctctgggcaataagtgagacagag
cgatctatgaaagctctactgtcgtttgcaaaatcacacagatttgatgtggaattcatt
gatgagggaagtaattcaatggatctctttgaagcttggaagaaggaatataagttgctt
catgaatattggatggctctgaggaatcgtgtgtctgctgttgatgaacttgcaatggcc
acagaacgactaagagtccgtgatcctcgggagccaaagcccagcccaccagttcttcac
atcattgaaccacatgaggtagaacagaatcgtataaaactgctaaatgataaagctgtt
gctacatcccagttgcagaaaaagcttgggcagcttctttacctaactaacttggaaaag
tctcaggacaaaacatcaggaggtattaatccagaaccttgtccaatctgtgctcggcaa
ctgggaaagcagtgggcagtactgacctgcgggcactgtttctgtaacgagtgcatttca
attattatcgaacagtacagcgtggggtctcacaggagctccattaagtgtgctatctgc
cgccagaccacgtctcacaaggaagtctcctatgtcttcacctcagagaaagccagccag
gaagaagacatccctgtgaagggcagccattctacaaaagtggaagctgtggtcagaact
ctgatgagaatccagcttagagacccaggggctaaggctcttgttttctcaacgtggcaa
gatgtattagacattatttcaaaagctctcactgacaacaacatggaatttgcacagatc
agtcgtgttaagacatttcaggagaacctgtcagcatttaagtatgatccccaaatcaat
attttgctgctgcccctgcacacaggttctaatggattaactatcattgaagcaactcat
gttctcttggtggagcccatattgaaccctgcccatgagcttcaggccatcggaagggtg
caccggattggacaaacaaaacccactattgtacacagattcttaataaaggcgacaata
gaagaaagaatgcaagcaatgctgaaaactgctgaaaggagtcacacgaacccttccgca
aagcattccgaggcctctgtcttgaccgtggctgacctggcagacctcttcaccaaagac
accgaagaccttgaatga
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integrated database retrieval system
