Odocoileus virginianus (white-tailed deer): 110141398
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Entry
110141398 CDS
T10722
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04340
Hedgehog signaling pathway
ovr04360
Axon guidance
ovr05200
Pathways in cancer
ovr05205
Proteoglycans in cancer
ovr05217
Basal cell carcinoma
ovr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110141398 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110141398 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110141398 (SHH)
05205 Proteoglycans in cancer
110141398 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
110141398 (SHH)
05217 Basal cell carcinoma
110141398 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ovr01002
]
110141398 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110141398 (SHH)
Peptidases and inhibitors [BR:
ovr01002
]
Cysteine peptidases
Family C46: hedgehog family
110141398 (SHH)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Morphogens
110141398 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
110141398
NCBI-ProteinID:
XP_070336273
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All DBs
Position
1:2321826..2333978
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AA seq
453 aa
AA seq
DB search
MLLLARCLLVLLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSDFLT
FLDRDRGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAAGAPEGAAAAAGGAAPGRR
ALFASRVRPGQHVYVVAERGGARRLLPAAVHSVTLREETAGAYAPLTAHGTILINRVLAS
CYAVIEEHSWAHGAFAPYRLAHALLAALAPGRTDRGGAGDGGGGGRVPQPVPGAADAPGA
AGIHWYSELLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggcgagatgtctcctggtgctgctggtctcctcgctgttgatgtgctcg
gggctggcgtgcggacccggcaggggatttggcaagaggcggaaccccaaaaagctgacc
cctttagcctacaagcagtttatccccaacgtggccgagaagaccctaggggccagcgga
agatacgaggggaagatcaccagaaactcagagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaagaaaacactggagcggaccggctgatgactcag
aggtgcaaggacaagctgaacgccttagccatctccgtgatgaaccagtggccgggcgtg
aagctgcgggtgactgagggctgggatgaggacggccaccactcggaggagtcgctgcac
tacgagggccgcgcagtggacatcaccacctcggaccgcgaccgcagcaagtacggcatg
ctggcgcgcctggccgtggaggccggcttcgactgggtctactacgagtccaaggcgcac
atccactgctcggtgaaagcagagaactcggtggcggccaagtcgggaggctgcttcccg
ggctcggccacggtgcacctggagcagggcggcaccaagctggtgaaggacctgaggccc
ggggaccgcgtgctggcggccgacgacgagggccggctgctctacagcgacttcctcacc
ttcctggaccgcgaccgtggcgccaagaaggtcttctacgccatcgagacgcgggagcct
cgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaacggctcg
gccgcaggggcgcccgagggggcggcggcggcggcgggcggggccgcgccagggcgccgg
gcgcttttcgccagccgcgtgcggccgggccagcacgtgtacgtggtggccgagcgcggc
ggggcccggcggctgctgcccgccgcggtgcacagcgtgacgctgcgcgaggagacggcg
ggcgcctacgcgccgctcacggcacacgggaccatcctcatcaaccgggtgctggcctcg
tgctacgcggtcatcgaggagcacagctgggcgcacggggccttcgcgccctaccgtctg
gcgcacgcgctcctggccgcgctggcgcccgggcgcacggaccgcggcggagccggcgac
ggcgggggcggcggccgcgtcccacagcccgtgccgggggcggccgacgcgccgggcgcc
gcgggcatccactggtactcggagctgctctaccaaataggcacctggctgttggacagc
gaggccttgcacccgctgggtatggcggtcaagtccagctga
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