Odocoileus virginianus (white-tailed deer): 110142081
Help
Entry
110142081 CDS
T10722
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03022
Basal transcription factors
ovr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110142081 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110142081 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110142081 (TAF4)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110142081 (TAF4)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110142081 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
110142081 (TAF4)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110142081 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
110142081
NCBI-ProteinID:
XP_070328546
UniProt:
A0ABM4IL46
LinkDB
All DBs
Position
9:51083616..51146395
Genome browser
AA seq
1028 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAVPAEGAPAAAPEPPPAGPAAKLSALEAGAGAGAGAGAGAAAGACPPGTAAAPEP
AAKPVARNGPPGGPGAAQTLNGSAALGNSLRAAAAPAVSLLHNGPAPAPPPPKPAAATVI
QTPPFLGAPAAPAPRAPSPPAAPAPAAPPAPPAPAAAAPPPPPPAAGSLARPPGPPAGPP
AAAQNGGSAAPAPAPAPAPAPAPAPAPAANSQPGPAAAPAQVAKADSPKTALQPAPPPPQ
TLATSCPAGAGSGMILGPTMQGALPAAAAAGLPPPAPGTPTGLPKGSASAVTQSLPRTPS
ATTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQ
AQAHAQAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQ
PSTALQRSPGVQPQLVLGGAAQTTSLGTATAVQTATPQRTVPGATTTSTAATETMENVKK
CKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVP
FLKRSLPALRQLTPDSAAFIQQSQQQPPASQATTALTAVVLSGSVQRTAGKTAATVTSAL
QPPVISLTQPTQVGVGKQGQPTPLVIQPPPKPGALIRPPQVTLTQTPMVALRQPHNRIVL
TTPQQIQLNQLQPVPVVKPAVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFRDDDDINDV
ASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAPLQRRILEIGKKHGITELHPD
VVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQR
KDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKVDSPGPGSGPEGSGPGSAVPGSSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSL
LLYKAFLK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagccgtgccggccgagggcgcgcccgcagcggcgccggagccgccc
cccgcagggcccgccgcgaagctgagcgcgctcgaggccggcgcgggcgccggggccgga
gccggagcgggcgccgcggccggggcctgcccgccggggactgcggccgcgcccgagccc
gccgccaagcccgtcgcccgcaacggcccgcccggcggccccggcgccgcgcaaactttg
aatgggagcgccgcgctggggaactcgctccgcgccgccgccgcacctgctgtcagcctg
ctccacaacgggcccgcgcccgcgccgccgccgcccaagcccgccgccgccactgtcatc
cagacgccgcccttcctcggcgcccccgccgcgcccgcgccccgcgccccctcgcccccc
gcggcccctgcgcccgccgcgccccctgcgcctcccgcgcccgccgccgccgccccgccg
ccgccgccgcccgcggccggcagcctggcccggccgcccgggcccccggccggaccaccg
gcggccgcgcagaacgggggcagcgccgcgcccgcccccgcgcccgcccctgcccccgcg
cccgcgcccgccccggcgcccgccgccaacagtcagcccgggcccgccgccgcgcccgcg
caggtggccaaggccgactcgcccaagaccgccctgcagccggcgcccccgccgccgcag
accctggcgaccagctgcccggccggcgcggggtccggcatgatcctcgggccaactatg
caaggggcactgcccgccgccgccgccgccggcctcccgccgccggccccgggcaccccc
accgggctgcccaagggctcggccagcgcggtgacccagagcctgcccaggacgccctcg
gccaccaccggcgggatccgggccacgctgacgcccactgtcctcgccccacgcctgccg
cagccgccgcagaaccccaccaacatccagaacttccagctgcccccaggtatggtcctc
gtgcggagcgagaatgggcagctgctcatgatccctcagcaggccctggctcagatgcag
gcccaggcccacgcccaggcgcagccgcagactaccatggcaccgcgcccggccaccccc
acaagtgcccctcccgtgcagatctccaccgtgcaggcacccgggaccccaattattgca
cggcaggtgaccccaacgaccataatcaagcaggtgtctcaggcccagacaacggtacag
cccagcaccgcactgcagcgctcgcccggggttcagcctcagcttgttttgggtggcgct
gctcagacaacctcacttgggacggcaacagctgttcagacggcgacacctcagcggacg
gtcccaggggccaccaccacctcgacagctgccacggaaactatggaaaacgtgaagaaa
tgtaaaaattttttatctacgttaataaaactggcttcgtctggtaaacagtctacagag
acggccgctaatgtgaaagaactggtacagaatctgctggatggaaaaattgaagcagaa
gatttcactagtaggttataccgagagcttaattcttcacctcaaccttaccttgtgcct
ttcctgaagaggagcttgcccgccttgagacagctgacccccgactccgcggccttcatc
cagcagagccagcagcagccaccggcttcgcaggccaccaccgcgctcaccgccgtggtg
ctcagtggctcggtccagcgcacggctgggaagacggcggccaccgtgaccagcgccctc
cagccccctgtcatcagcctcacgcagcccacacaggtgggcgtcggcaagcaggggcag
cccacgccgctggtgatccagccgccgcccaagcccggagcgctgatccggccgccgcag
gtgacactgacgcagacgcccatggtcgcgctccggcagccccacaaccgcatcgtgctc
accacgccccagcagatccagctgaaccagctgcagccagtccctgtggtgaaacctgct
gtgttacctggaaccaaagctctttctactgtctccgcacaagctgctgctgcacagaaa
aataaactcaaggagcccgggggaggctcgtttcgggatgatgatgacatcaatgacgta
gcgtccatggctggagtgaacctgtcagaagaaagcgcgagaatattggccacaaactcc
gagttggtgggcaccctgacacggtcctgcaaagatgagaccttcctactcccggcacct
ctgcagagaaggatattagaaatagggaagaaacacggcatcacggagttgcacccagac
gtggtgagttatgtgtcacatgccacgcagcagaggctgcagaacctggtggagaagata
tcggagacggcccagcagaagaacttctcttacaaggatgatgacagatacgaacaggca
agtgatgtccgggctcagctcaaattttttgaacagcttgatcaaattgaaaaacagaga
aaagatgaacaggaaagagagatcttgatgcgggcagcaaagtctcgatccagacaagaa
gatccagaacagttaaggttgaaacagaaggcaaaggagatgcagcaacaagaactggca
cagatgaggcagcgagatgccaacctcacagcactagccgccatcgggccccggaaaaag
aggaaagtggactccccgggaccgggatcgggaccagagggctcgggcccaggctcggcg
gtcccaggcagttccggcgtcggaacccccagacagttcacgcggcaaaggatcacgcgg
gtcaacctcagggacctcatattttgtttagaaaatgaacgtgagacaagccattcactg
ttgctgtacaaagcattccttaagtag
DBGET
integrated database retrieval system
