Odocoileus virginianus (white-tailed deer): 110142229
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Entry
110142229 CDS
T10722
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110142229 (SBNO1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110142229 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110142229
NCBI-ProteinID:
XP_020756974
UniProt:
A0A6J0Y5X7
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All DBs
Position
12:48755591..48811134
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AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATPTPTPPIQQSVPLSALELGLETEAA
VPVKQEPETVPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAVRNAITSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNSSSPRDSPCKENKTKKRKGEEITREAKKAR
KIGGLTGSSSDDSGSESDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KDHKKNKDKKKRKSIDPDSIQSALLASGLGSKRPSFSSTPVVSPAPNSAPANSNTNSNSS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINLLSTSDQSQQLAVQQKQLWQ
QRHPQSIASLSST
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgctttgagcgagagtggaattagtcca
aatgacctctttgatattgatggtggagatgcggggcttgcaactccaacacctacgcct
cccatacagcagtcagtgccacttagtgcattagaactaggtttggagactgaagcagca
gttcctgttaaacaagaaccagagacggtacctactccggcacttttaaatgttaggcag
cagcctccatctactacaacgtttgtgctgaatcagataaatcagcttccaaccttggga
tctacaattgtaatgactaagacaccacctgtaaccacgaataggcaaaccatcacttta
acgaagtttattcagactactgcaaacacacgcccttcagtctcagcaccagcagtacga
aatgccataacttctgcaccttcaaaagaccaagttcaactgaaggacctgctaaaaaat
aatagtctgaatgaactcatgaaactgaagccaccggctaatattgctcagccagttgca
acagcagctactgatgtaagcaatggcacagtaaagaaagagtcttctaataaagaagta
gcaagaatatggataaatgacatgaaaatgaggagtttttccccaaccatgaaggtccct
gttgtgaaagaggaagatgaaccagaagaagaagatgaagaagaaatgggtcatgcggaa
acctatgcagagtatatgccaataaaattaaaaattggtctacgtcacccagatgctgta
gttgagactagttctttatccagtgttactcctcctgatgtttggtacaagacatctatt
tctgaagaaaccattgataatggctggttatcagcattacagcttgaagcaattacttat
gcagcccagcaacatgaaacgttcctacctaatggagatcgtgccggcttcttaataggc
gatggtgctggtgtaggaaaaggaaggacaatagcaggaatcatctatgaaaattatttg
ttgagtagaaaacgggctttgtggttcagtgtttcaaatgatttaaagtatgatgctgaa
agagatttgagggatattggagcaaaaaacattttggtccattcattgaataagtttaaa
tatggaaaaatttcttccaaacataatgggagtgtgaagaagggtgttatttttgctacc
tattcttcccttattggtgaaagtcagtctggtggtaaatataagacgaggttaaaacaa
cttctacattggtgcggtgatgacttcgatggagtgatagtttttgatgaatgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagcagtttta
gaacttcagaacaaattgccaaaagccagagttgtctatgctagtgccactggtgcttct
gaaccacgaaatatggcctatatgaaccgtcttggaatatggggtgagggaactccattt
agagaattcagtgactttattcaggcagtagaacggagaggtgttggtgccatggaaata
gttgctatggatatgaagcttagaggaatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaa
gcagtcaaactgtgggtcattgctcgagagcggtttcagcaagctgcagatcttattgat
gctgagcagagaatgaagaaatccatgtggggtcagttctggtctgctcaccagagattt
ttcaaatacttgtgcatagcgtccaaagttaaaagggttgtgcagctagctcgagaagaa
atcaagaatggaaaatgtgttgtaattggtctgcagtctaccggagaagctagaacatta
gaagccttggaagagggcgggggagaattgaatgattttgtttcaactgccaaaggagtg
ttacagtcacttattgaaaaacacttccctgctccggacagaaaaaagctttatagtttg
ctgggaattgatttgacagctccaagtaacagcagttcaccaagagatagtccttgtaag
gaaaataaaacaaaaaagcggaaaggtgaagaaataactcgagaagccaaaaaagcacga
aaaataggtggccttactggtagcagttctgatgatagtggaagtgaatctgatgcctct
gataatgaagaaagtgactatgagagctctaaaaacatgagttctggagatgatgatgat
ttcaatccattcagagatgagtctagtgaggatgatgaagatgatccctggttaatcaga
aaagatcataagaaaaacaaagacaaaaaaaaaaggaaaagtatagatccagattctatt
caaagtgccttattagcatcgggtcttggatcaaaacgacctagtttttcttctacacca
gttgtttcacctgctcctaacagtgcaccagctaacagtaacaccaacagcaacagtagc
cttataacaagtcaagatgccgtggaaagggcccaacagatgaagaaagacctacttgat
aaactagaaaaattagctgaagacctccctcctaataccctggatgaacttattgatgaa
cttggtggccctgagaatgttgctgagatgactggccgcaaggggagggttgtaagcaat
gatgatggaagcatatcttatgagtcaagatctgaacttgatgttcctgtggaaatacta
aatattacagaaaaacaaagatttatggatggagataagaatattgctatcatctcagaa
gctgccagctcaggtatttcattacaagcggatagaagagctaaaaatcaaaggcggaga
gttcatatgactctggagttaccatggagtgctgatagagcaattcagcaatttggacga
actcatagatcaaatcaagttaccgctcctgaatatgtgtttctgatttctgaattggca
ggagaacaaagatttgcatctattgttgctaaaagacttgagagtttgggtgcacttaca
catggagacagaagagcaacagaatctagagatctgagccggttcaacttcgataataag
tatggaagaaatgctttagaaattgtcatgaaatccatcgtaaacctagattctcctatg
gtatcaccacctccagactatcctggagaattctttaaagatgttcgacaaggactgata
ggagttggtctaataaatgtagaagatcgttcgggaattcttactctagataaagattat
aacaacataggaaaattcttaaacagaattttgggcatggaagtacatcaacagaatgca
ttatttcagtattttgcggacacgcttactgcagtcgttcaaaatgccaaaaaaaatgga
agatatgatatgggaattttagatcttggttctggagatgaaaaagtgaggaaaagtgat
gttaagaagtttctgactccaggatattcaacatctggccatgtagaattatacacaata
agtgtggagaggggaatgtcttgggaggaagctaccaagatttgggctgagctgacagga
ccagatgatggcttttatttgtcactgcaaataagaaacaacaagaaaactgccatctta
gttaaagaagtgaaccctaagaagaagcttttcttagtttatagaccaaataccgggaaa
cagctcaaattagaaatttatgctgatctaaaaaagaaatacaagaaggtagtctctgac
gatgccctggtccactggttagatcagtataattcatctgcagatacttgtactcatgct
tattggcgtggcaactgcaaaaaagcaagcttgggattagtttgtgaaataggtcttcgt
tgccgcacatactatgtattatgtggctcagtactgagtgtctggacaaaagttgagggt
gttcttgcgtctgtcagtggcacaaatgtgaaaatgcagatagttcgcctaagaacagag
gatggacaacggattgtaggtttgattattcctgcaaattgtgtgtctcctcttataaat
ctcctttcaacttcagaccagtctcaacagcttgcagtccagcagaaacagctctggcag
cagcgtcacccccagagcatcgccagcttgagcagcacataa
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