Odocoileus virginianus (white-tailed deer): 110142493
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Entry
110142493 CDS
T10722
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110142493 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110142493 (NFASC)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
L1 family
110142493 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
110142493
NCBI-ProteinID:
XP_070330711
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All DBs
Position
11:complement(71326512..71521888)
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AA seq
1358 aa
AA seq
DB search
MAGPPPPWACTAVLLCALSLSGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILI
ECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFAR
NKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSME
PITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTNHPYND
SSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKG
GDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPK
NLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRA
VYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRW
FKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRI
YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDSLTIFGVAE
RDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSV
RLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAVLRLSPYVNYQFRVIA
INEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGSRKNNMEITWTPMNATSAFGPNLRYI
VKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDY
PRAAPTDVKIRVLNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQA
GFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPN
LETINLEWDHPEHPNGILIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRADPVSRYR
FSLSARTQVGSGEAVTEESPAPPNEATPTAAPPTSPPTTVGVPGTVSSTDAPATTATTEA
TTVPTVPPVAPTTAATTEATATTASTAATTTESPAATRTEIRESAPDEQSIWNVTVLPNS
KWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPLQLTDLYPGMTYTLRIYSRDN
EGISSAVITFMTSAAYTNNQADIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVR
EKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQF
NEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccaccgccaccctgggcctgcacagccgtcctcctctgcgcgctcagcctc
agcggggccatcgagattcccatggacccaagcattcagaatgagctgtcccagcccccg
accatcaccaagcagtcagtgaaggaccacattgtggatccccgtgacaacatcttgatc
gaatgtgaagccaaggggaaccctgcccccagcttccactggacgcgcaacagcaagttc
ttcaacatcgccaaggacccccgggtgtcgatgaggaggcggtctggaaccctggtgatc
gacttccgcagtggcgggcggcccgaggagtatgagggggaataccagtgctttgcccgc
aacaaattcggcacggccctgtccaatcggattcgcctgcaggtgtccaaatcccccctg
tggcccaaggaaaacctagaccccgtcgtggttcaagaaggtgcccccttgacactccag
tgcaaccccccacctgggcttccgtccccagtcatcttctggatgagcagctccatggag
cccatcacccaagacaaacgtgtctcccagggccataatggagacctgtatttctctaat
gtgatgctgcaggacatgcagacagactacagctgcaatgcccgcttccacttcacccac
accatccagcagaagaacccattcaacctcaaagtcctgaccaaccacccctataatgac
tcgtccttaagaaaccaccctgacatgtacagtgcccgaggagttgcagagagaacaccc
agcttcatgtatccccagggcactgcgagcagtcagatggtgctgcgtggcatggacctc
ctgctggagtgcatcgcctctggggtcccaacaccagacattgcatggtacaagaagggt
ggggacctgccatccgacaaggccaagtttgagaacttcaacaaggccctgcgcatcacc
aatgtgtccgaggaagactctggggagtatttctgcctggcctccaacaagatgggcagt
atccggcacacgatctcggtgagagtgaaggctgctccctactggctggatgaacccaag
aacctcatcctggctcctggcgaggatgggagactggtgtgtcgagccaatgggaacccc
aagcccacggtccagtggatggtgaatggggaacctttgcaatcggcaccgcccaacccc
aaccgtgaggtggccggggacaccatcatcttccgtgacacgcagatcagcagccgggcc
gtgtaccagtgcaacacttccaacgagcacggctacctgctggccaacgccttcgtcagc
gtgctggacgtgccgcctcggatgctgtcaccgcggaaccagctcatcagggtgatcctg
tacaaccggacccggctggactgcccgttctttgggtctcccatccccacgctccgatgg
tttaagaatggacaaggaagcaacctggatggtggcaactaccacgtctacgagaatggc
agtctggaaatcaagatgatccgaaaagaggaccagggcatctacacctgtgttgccacc
aacatcctgggcaaagcggagaaccaggtccgcctcgaggtcaaagaccccacgaggatc
taccggatgcccgaggaccaggttgccaagaggggcaccacggtgcagctggagtgccgt
gtgaagcacgacccctccctgaagcttgcggtctcctggctgaaggacgatgagccgctc
tacatcagcaacagaatgaagaaggaggaggactccctgaccatcttcggtgtggccgag
cgggaccagggcagctacacgtgtgtcgccagcaccgagctggaccaggacctggccaaa
gcctacctgacggtgctagctgatcaggctactccaactaaccgtttggctgcccttccc
aaaggacgaccggaccgaccccgggacctggagctcactgacctggccgagagaagcgtg
aggctgacctggatcccaggggacgacaacaacagccccatcacagactacgttgtccag
tttgaagaagaccagttccagccaggggtctggcatgaccattccaagttcccgggcagt
gtcaactcagctgtgctccggctgtcaccctacgtcaattaccagttccgggtcatcgcc
atcaacgaggtgggcagcagccaccccagcctcccgtctgagcgctaccgaaccagcgga
gcaccccccgagtccaacccgtccgacgtgaagggagaggggagcaggaagaacaacatg
gagatcacgtggacgcccatgaatgccacctccgccttcggccccaacctgcgctacatc
gtcaagtggcggcggagagagacccgcgaggcctggaacaacgtcacggtgtggggctcc
cgctatgtggtggggcagacccccgtctacgtgccctacgagatccgagtccaggctgaa
aacgactttgggaagggccctgagccagacaccgtcatcggttactctggagaagattat
cccagggctgcacccactgatgttaaaatccgagtcctgaacagcaccgccatcagcctg
cagtggaaccgcgtctactccgacacggtccagggccagctcagagaatatcgagcctac
tactggagggagagcagcttgctgaagaacctgtgggtgtctcagaagaggcagcaagct
ggcttccccggcgaccgcttgcgtggcgtggtgtcccgcctcttcccctacagtaactac
aagctggagatggttgtggtcaatgggcgaggcgatgggcctcgcagtgaaaccaaggag
ttcaccaccccggaaggagtacccagtgcccccaggcgtttccgagtccggcagcccaac
ctggagacaatcaacctggaatgggatcatccagaacaccccaatgggatcctgattgga
tatactctcaaatacgtggcctttaatggaaccaaagtaggaaagcagatagtggaaaac
ttctctcccaatcagaccaagttcacggtgcaaagagcagaccccgtgtcgcgctaccgc
ttttccctcagtgccaggacgcaggtgggctcaggggaagcagtcacggaggagtcacca
gcgccccccaatgaagccactccaaccgcagcgcctcccacgtcgcccccgaccacggtg
ggtgtgcctggcacggtgagcagtaccgatgcccctgccaccaccgccaccaccgaagcc
acaacagtccccaccgtcccacctgtcgcacctaccaccgccgccaccaccgaggccaca
gccactacggcctccaccgccgccaccaccacggagagtcccgccgccaccaggactgag
atccgagaatcggcccccgacgagcagtccatctggaacgtcactgtgctccccaacagt
aaatgggccaacatcacctggaagcacaatttcgggcccggaactgactttgtggttgag
tacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcccagccccta
cagctgacagacctctatcccgggatgacatacacgttgcgcatttattcccgggacaac
gagggcatcagcagtgccgtcatcacctttatgaccagtgcagcctacaccaacaaccag
gcggatatcgccacccagggctggttcatcgggctcatgtgtgccgttgccctgctggtg
ctgatcctgctcatcgtctgtttcatcaagaggagtcgcggcggcaagtaccccgtgcga
gaaaagaaggatgtgccccttggacctgaagaccccaaagaagaggatggctccttcgat
tacagtgacgaggacaacaagcccctgcagggcagccagacgtccctggacggcaccatc
aagcagcaggagagtgacgacagcctggtggactacggcgagggcggggagggccagttc
aacgaggacggctccttcatcggccagtacacggtcaagaaggacaaggaggagacggag
ggcaacgagagctcggaggccacgtcgccagtcaacgccatctattctctggcctaa
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