Odocoileus virginianus (white-tailed deer): 110143891
Help
Entry
110143891 CDS
T10722
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110143891 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110143891
NCBI-ProteinID:
XP_070336683
LinkDB
All DBs
Position
18:36681701..36967720
Genome browser
AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENSFSEKIHQCTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQAVKEGHSG
EKNIQDIYNIRNHPQPLITVLEHRPDCWPVILQQLTAFFQQCLERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLTLLKVLLKPRVPCDKDQPSVLEQQILQLCCDMVPCLQIKDLIQT
TEVMLFIEEVYLNLLRYPVFWKIQLTQLTLQLLCVCEVSLNITGECSSLIHLLEHSVELL
KEDFPVEPVIIGIALLLLQTPASQQKPILSLALKLLSSAESQKIPKSSLLLVMPVLQILS
STALEDCISMDEEGPSRQELALNLLEMVQQECYRDEHQKLSYKLAFPITSMYGSVFTAWR
ILEVMREESAASNWLASVESLLPITTVIPAHVFLLLAYLLVEDKGRNLHQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLAPALYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLK
ALTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKIQVLSFLWNHTQNKDPVVANAAYKSLSHFGAG
DHTILHLPEEVRPEIQTPDDLDEDEDEDGDEKEVDLSIPGSCYLKLLSLTAPSVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGARLDQGKTVAGIPNFMLKMYETNKQPGLKPGLAGG
MLFCYDISMYQSKDGKPLHRLMASRGRSFKQTLLALVHEVHIQLSEWHRAIFLPQAWLAY
VTRAYHAILQGRLGELELQLKHGKEGPEEVQYKKNTAWLWVRDMLTDEVIKASAKDSPVV
KGNALLALSSLAVVVSKHEASLCSDSDGVLEVQPHFLSVKDWVTMVFDTLLVIVDSHYQP
RGQFFSSFYHKSYSGENTASAIARSAAATALSFLVPIFIISCKEKVEEILNMLTARLPGK
PSADESQAVQIHMGLALGMFLSRLCEEKLSDISSQQMNLLLMKSLDALENCCFDPSLEYN
TGCILGAGLVLSLMSHSGQTESRVHVAASLRKLSAYLDASGSQSRTFQEVLAYTLSCVCT
SAFSAGIIEAVEAEDIMNKLRLLVDNNQQTSGFALALGNIIHGLSVCGHGKAEDLGNRLL
PAWIKTVLTQGSPTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSQFQGRLNEVIRTLTQ
VISVSGVIGLQSNAIWLLGHLHLSTLSSNQSRTSVPTDYSYLPESSFIRAAVGFFVTGGK
KGPESVPPSLLKVVMKPIATVGENHQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNVTALLGMWVMPPLIHGLSLNVKKYLLLSVPSWIKCVSDEQTVGFVESLMVAVFKA
ASPLSSPELRLSALQGLSQAMKLPSPSHHLWSLLSEATRKIFDLLPNKIRRNDLELYISV
AKCLSEMTDDEANRIAQITESSLEKAAFVRLYLVSQGRFPLMGLTDVLTVAVRHREKDTL
AWMTLQSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSVQNVALDEALDFLLLI
FAAAVVAWADHAAPLLLGLSASWLPWHQEHGPAGPASSLLGRSPLHRVTLQEALTLLPSS
MPLLLQKEPWQEQTQKFIDWLFSIMESPKEGLSAKSRDLLKATLLSLRVLPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacatcaggaaaaggtttgaatttccaaattctcttatccagtcacaggct
gtgggtcatcttattgctgcagttctaaaggaaaacagcttttcagaaaagatccaccag
tgcacaaaccagactcctgccttgaacttgctatgggagaagtgttgcagcgacaatgtc
gtagttcgaacagcttgctgtgagggtctggtggcccttgttgctcaggatcacgcggag
ttcagctatgtcctcaatgggattctcaacctgattccatcaaccagaaatacacatggc
ttgattaaagccattatgaaactattacaaatgcaagctgttaaggaaggacacagtggg
gagaagaacattcaggatatatataatattagaaaccatcctcagcctttgatcactgtt
cttgagcacagacctgattgctggccagtcattttgcagcagctgacagcttttttccag
caatgccttgaaaggtctgaagtttcatgtatccaaattatggcaccatttctatggtat
ctatattgtgaaccatcgcagttacaagaatatgctaaactccgattaactctgctcaaa
gtcttactcaaaccccgggtcccttgtgacaaagatcaaccatcagtactggaacaacag
atactacagctgtgttgtgacatggttccatgtttgcagatcaaagatttgatacagaca
acagaagtgatgctgtttattgaagaagtatacttaaaccttttgcgttatcctgttttc
tggaaaattcagcttacccagctgacccttcagctgctgtgtgtctgtgaagtcagctta
aacataactggggaatgttcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaaccagtcataattggaatagctttactacttctacagact
ccagcaagtcaacagaagccaatcttaagtctagctctgaagctcctttcttctgctgag
agtcagaagatcccaaagtcctcgttgctgctagtgatgccagtcctgcagatactgtct
tctactgccttggaagactgtatatccatggatgaagaaggtccctctaggcaggagttg
gctctaaaccttttagaaatggtacagcaggagtgctacagagacgagcaccaaaagctc
tcctacaagcttgcgttccccataaccagcatgtatggttcagtattcacagcctggagg
atccttgaagtgatgagagaagagtctgcggcaagtaactggctggcttctgtggagtcg
ctgctccctataaccacagtgatccctgctcatgtctttcttctgctggcttacctcctt
gttgaagataaggggcgaaatcttcaccagatactgaaggtcactacagaattagcccaa
gctgattcctctcaggtaccgaatctgattccagttttgatgttcaaattaggaagacca
ctggcacctgcgttgtacaatgatatcttgtatactttacctacacttggtgttcacaag
gtgtgcataggacagattctacgagtaattcaacttcttggaaccactccacaactaaaa
gctctcactttgcgcttgttgacatctttgtgggaaaaacaggatcgtgtctatcctgag
ctgcagcgtttcatggccatgtccgatgtgccctccctgtctgtgggcaaggaagtccag
tgggagaaactaattgctaaggcagcatcgatcagggatatatgtaagcaaaggccctat
cagcatggtgcagatatgttggcagctatttcccaggttttgaatgagtgcaccaagcct
gaccaagctaccccagcagccttggtgttacaaggtcttcatgcgctctgccaagctgag
gtggtttgtattcgctccacttggaatgctctctccccaaagctgagctgtgacacaaga
cctctcattttgaagaccctcagtgaactgttttctctggttccttccttaacagtcaat
acagctgaatatgagaattttaaaattcaagtcctcagcttcctctggaaccatactcaa
aacaaggacccagttgtcgcaaatgctgcctataaatctctgtcacactttggtgctggg
gaccacacgattcttcatctgcctgaagaggtaagaccagaaatccaaactcctgatgac
ctagatgaagatgaagatgaggacggtgatgaaaaagaggtggatctttccattcctggc
tcttgctatctcaaacttttgtcactcacagctccttcagttttgccagctttggaggaa
ttttttacatcacttgtgaagcaagaaatggtgaatatgccccgtggggtgtatcactct
gcattgaaaggaggtgcccgcttagatcaaggaaagactgtagcaggaatccccaatttt
atgttgaagatgtatgagacaaacaagcagccaggtttgaaacctggccttgcgggtggt
atgttattttgctatgatatttcaatgtatcagagtaaagatggcaaaccgttgcatcga
ctgatggccagtagagggcgaagtttcaagcagaccttacttgccctagtgcatgaggtt
catatccagctttccgagtggcaccgggcaatttttctcccccaggcctggctcgcgtat
gtgactcgtgcttatcatgccattttacagggaaggctaggagaactggaattgcagtta
aaacatggaaaagaaggacctgaagaggtgcagtacaaaaaaaacacagcctggctctgg
gttcgagacatgctgactgatgaagtcatcaaagcatctgcaaaagacagcccagtggtc
aaaggcaacgcgctgttagccttaagcagcctcgctgtcgtcgtttccaaacatgaagcc
agcctctgctcagactctgacggagtcctggaggttcaacctcatttcctgtcagtgaaa
gattgggttaccatggtgtttgatacccttctggtcattgttgatagccactaccaaccc
agaggacaatttttctcctcattttatcataaatcctattccggtgaaaacacggccagt
gccattgcccgttccgcggccgccacggctttgtccttccttgtgccaattttcattatc
tcttgcaaagagaaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaa
ccaagcgctgatgagtctcaagccgtgcaaatccacatgggccttgcactggggatgttt
ctctctcgcttgtgtgaggagaaactcagtgatatatctagccaacagatgaaccttctt
ctgatgaagtctttggatgccctggaaaactgctgctttgatcctagtcttgaatacaac
acgggctgcatactgggagctggcctcgtcctgtccctcatgagtcacagcggccagacg
gagtcccgagttcacgtggccgcctcgctccggaagctctccgcatacctggatgccagc
gggagccagagcagaaccttccaggaggtccttgcctataccctcagctgtgtatgtaca
tctgcgttcagtgctggcatcattgaggcagtggaggctgaagatatcatgaacaagctt
cgactgttagtggacaacaaccagcagacttcaggttttgccctggcattaggaaacata
attcatggcttgtctgtgtgtggacatggaaaagctgaagacttggggaacagattgctt
ccggcctggatcaaaactgtcctaacacagggctctcccacaatgctttgcttggcagct
cttcatggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcagaa
gccatccagtcctctcagtttcaaggcagacttaatgaagtcattagaactttaactcag
gtcatcagtgtgtctggggtgattggtcttcagtcaaatgccatctggcttctaggacat
cttcatctgtctactctgtcctcaaatcaaagtagaacctcggttcctactgactacagc
tatttgcctgaaagcagttttattagagcagccgttggcttcttcgttacaggaggaaaa
aaaggtcctgaatctgtgcccccttcccttctcaaagttgtgatgaaacctatagcaact
gttggagaaaaccaccagtatcctcctgtgaactgggctgctctcctctctccacttatg
aggctaaactttggtgaagagattcagcaactgtgtcttgaaattatggtgacccaggca
cagtcctcccagaatgtcactgcactgttgggaatgtgggtgatgccacctctgatccat
ggtctgagtctgaatgtcaagaaataccttctcctatctgtgccttcatggataaaatgt
gtctctgatgaacagactgtgggttttgttgaaagcttaatggtggcagtttttaaagca
gcttccccactctccagtcctgagttacgcctaagtgccttacagggcctgagtcaggcc
atgaaactgcccagcccttcccaccacctctggagtctgctcagcgaagctactaggaaa
atttttgacctcctgccaaataagattcggagaaatgatctagagctgtatatcagtgta
gcaaagtgcctctcggaaatgacagatgatgaagccaatcggattgcccagattactgag
agtagcctagaaaaggctgcctttgtcaggctctacttggtctctcaaggacgattcccc
ttgatgggcttgaccgatgtgctcactgttgctgtccggcaccgtgaaaaagacacgctg
gcttggatgacactgcagagcttataccaggcacggatcgtgagccatgccaacactggc
gtgttgaagagaatggagtggctcttggaactgatgggttatatcagaaatgttgcttac
cagtcaacatctgttcagaacgtggctcttgatgaggctttggacttcttgctgctgata
ttcgcagccgcagtggttgcatgggcagaccacgctgcccctctcctcctcggcctcagt
gccagttggttgccatggcatcaggaacatggcccagctgggccagcatcaagcttgctt
ggcaggagtccattacacagggtcactctgcaggaggctctcactctccttcccagtagc
atgcctcttctgctgcagaaagagccatggcaggaacagacccagaagttcattgactgg
ctgttcagcatcatggaaagccctaaggaaggactctcagcaaaatccagggatctttta
aaagctaccctgctgtccttgagagtgctcccagagtttaagaagaaagctgtatggacc
agagcctatggttggtga
DBGET
integrated database retrieval system
