Odocoileus virginianus (white-tailed deer): 110144176
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Entry
110144176 CDS
T10722
Symbol
NTN1
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110144176 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110144176 (NTN1)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
110144176 (NTN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
110144176
NCBI-ProteinID:
XP_070335187
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All DBs
Position
17:27059622..27267441
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AA seq
603 aa
AA seq
DB search
MRAVWEALAALAAVACLVGAARGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFG
KDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQ
SENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQC
RKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDS
LVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKG
KLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQNLWIRSRD
IACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagtgtgggaggcgctggcggcgctggcggccgtggcgtgcctggtgggcgcg
gcgcgcggcgggcccgggctcagcatgttcgccggccaggcggcgcagcccgacccctgc
tcggacgagaacggccacccgcgccgctgcatcccggactttgtcaacgcggccttcggc
aaggacgtgcgcgtgtccagcacctgcggccggcccccggcgcgctactgcgtggtgagc
gagcgcggcgaggaacggctgcgctcctgccacctctgcaacgcgtcggaccccaagaag
gcgcacccgcccgccttcctcaccgatctcaacaacccgcacaacctgacgtgctggcag
tcggagaactacctgcagttcccgcacaacgtcacgctcacgctgtcgctcggcaagaag
ttcgaggtgacctacgtgagcctgcagttctgctcgccccggcccgagtccatggccatc
tacaagtccatggactacgggcgcacgtgggtgccctttcagttctactccacgcagtgc
cgcaagatgtacaaccggccgcaccgcgcgcccatcaccaaacagaacgagcaagaggcc
gtgtgcaccgactcacacaccgacatgcgcccactctctggcggcctcatcgccttcagc
acgctggacgggcgaccatcggcgcacgacttcgacaactcgccggtgctgcaggactgg
gttacggccaccgacatccgcgtggctttcagccgcctgcacacgttcggcgacgaaaac
gaggacgactcggagctggcgcgcgactcgtacttctacgccgtgtccgacctgcaggtg
ggcggccgctgcaagtgcaacggccacgcggcccgctgcgtgcgcgaccgcgacgacagc
ttggtgtgcgactgcaggcacaacacggccggcccggagtgtgaccgctgcaagcccttc
cactacgaccggccctggcagcgcgccaccgcccgcgaggccaacgagtgcgtggcctgt
aactgcaacctgcacgcccggcggtgccgcttcaacatggagctttacaagctgtcgggg
cgcaagagcgggggcgtctgccttaactgtcgccacaacacggccggccgccactgccac
tactgcaaggagggctactaccgcgacctgggcaagcccatcacccaccgcaaggcctgc
aaagcctgcgattgccaccccgtgggcgctgctggcaagacctgcaaccagaccacgggc
cagtgtccctgcaaggacggcgtgaccggcatcacctgcaaccgctgtgccaagggctac
cagcagagccgctcacccatcgccccctgcataaagatccctgtggcaccgccgaccact
gcagccagcagcgtggaggagcccgaagactgtgattcctactgcaaggcctccaaaggg
aagctgaagataaacatgaaaaaatactgcaagaaggactatgccgtccagatccacatc
ctgaaggcggacaaggcaggggactggtggaagttcacggtgaacatcatctccgtgtac
aagcagggcaccagccgcatccgccgcggtgaccagaacctgtggatccgctcgcgggac
atcgcctgcaagtgcccgaaaatcaagcccctcaagaagtacctgctgctgggcaacgcg
gaggactcgcctgaccagagcggcatcgtggcggacaagagcagcctggtgatccagtgg
cgggacacgtgggcgcggcggctgcgcaagttccagcagcgcgagaagaagggcaagtgc
aagaaggcctag
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