Odocoileus virginianus (white-tailed deer): 110144657
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Entry
110144657 CDS
T10722
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110144657 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110144657 (BARD1)
04121 Ubiquitin system [BR:
ovr04121
]
110144657 (BARD1)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110144657 (BARD1)
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110144657 (BARD1)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110144657 (BARD1)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110144657 (BARD1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110144657 (BARD1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110144657 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110144657
NCBI-ProteinID:
XP_070314714
UniProt:
A0ABM4HGL9
LinkDB
All DBs
Position
30:complement(18780065..18861851)
Genome browser
AA seq
776 aa
AA seq
DB search
MQGNRQPRVRSGNQPHPAPAMKPAGSGAWAHSRAAFDRLEKLLRCSRCTDILREPVCLGG
CEHIFCSNCVSDCIGSGCPVCYTPAWIQDVKINRQLDSMIQLCNKLRNLLHGTGFSDLKE
ETSRKSFFNDAQNKKNSIKMWFSPRSKKVRYTVNKLSVQTQPSVKNDENAQQTSMYEFVS
PSPPVEVSERPKKPSTKSRKKQKKKTLAEVNQKWNLEAEKKDGDLDSKKESKEKLVSFCS
QPSVIANLPINGEIDLLASGSVTESECFGDLAEVFLPLAEHIESPEIESKNEVVTPEKTV
SANCLPSEKSLPSGRNGTRGRHNRVSSPVSKRCRSSSQSTGGNSAKQTVLPEHMPSPGRS
SPSPDKLKVGATLRRKSITILDESISFSPSTPPSSLNSPSYRRLMCSPSTTKPWPTRLTA
VKRNRRGETLLHVASIKGDIPSVEYLLQCGSDPNVKDHAGWTPLHEACNHGHLKVVELLL
QHKALVNTTGYQNDSPLHDAVKNGHVDIVKLLLAYGASREAVNIFGLRPVDYADSKNMKS
LLLLPEKKESSSTSHCSVVNTGQRRDGPLALIGSGLSSEQQKMLSELAAILKAKKCAEFD
STVTHVIVPGDTVQNTLKCMLGILSGCWILKFEWVKACLQSKGYEQEEKYEIPEGPQKSR
LNREQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAGGGQILIRKPKPDSDVTQTINTVA
YHAKPDSDQHFCTQYIIYEDLSNHRPERVRQGKVWMATSSWFIDCVMSFELLPLDN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaccggcagccgagggtccgctccgggaaccagcctcatcccgcgcccgcc
atgaaaccggcgggcagcggggcctgggcccacagccgcgccgcgtttgaccggctggag
aagctgctgcgctgctcacgctgcactgatattctgagggagcctgtgtgcttaggtgga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaagtggatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaacagacagctggacagcatgatc
cagctctgtaataaacttcggaatttgctgcatggcactggtttttcagatttgaaagaa
gaaacatctaggaaaagtttttttaatgatgcacaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatactgtgaataaactttcagtgcaaacc
cagccttctgtgaaaaatgatgaaaatgctcagcagacttccatgtacgaatttgtctct
ccgagccctccggtggaggtttctgagaggcctaagaagccttccacaaagtctagaaaa
aaacagaaaaagaaaactttagctgaagtcaaccaaaaatggaatttagaggcagaaaag
aaagatggtgaccttgactccaaaaaagaaagtaaggaaaagctggtgtccttctgtagc
caaccatctgtgattgctaacctgccgataaatggtgaaatagacttactagcaagtggg
tccgtaacagaatctgaatgtttcggggacttggctgaagtctttttaccattggctgag
catatagagtctccagaaattgagagcaagaatgaagtggtgactcctgagaagacagtc
tctgcaaactgtcttccgtccgagaagtccttgccatcaggtcgtaatgggacgcgtggg
cgtcacaacagagtttccagtcctgtttctaagagatgcagaagcagcagtcagagcact
ggtgggaactctgctaagcaaacagtgctgccagaacacatgccatcgcctggccgttct
tcaccatctccagacaaacttaaagttggtgccacgttaaggaggaaaagcatcactatc
ctggatgaatccattagcttctcaccgagcacaccaccgtcttcactgaacagtcccagt
tacagacggctgatgtgtagtccctcaacaacgaagccgtggcccacccggcttaccgct
gtgaagagaaaccgtcgaggagagactctgctccatgttgcttcaatcaagggcgacatc
ccttctgttgaatacctcttacaatgtggaagcgatccaaatgttaaagaccatgctgga
tggacaccattgcatgaagcctgcaatcacgggcacctgaaggtggtggaattgctgctc
cagcacaaggcattggtgaataccactgggtatcagaacgactcacctcttcatgacgca
gtgaagaatgggcatgtggacattgtcaagctgctactcgcctatggagcctccagggag
gcagtcaacatatttggtctgcggcctgtggattatgcagacagtaaaaatatgaaatcg
ctgttgctgctaccggagaagaaggaatcatcgtcaaccagccattgctcagtagtaaac
actggtcagcgtcgggatgggcctcttgcacttataggcagcggactttcttctgaacag
cagaaaatgctcagtgagcttgcagcgattcttaaggctaaaaaatgtgctgagtttgac
agtacagtaactcatgtcattgttcctggtgatacagttcaaaacaccctgaaatgtatg
cttggaattctcagtggatgctggatcctaaaatttgaatgggtgaaagcatgtctgcaa
agcaaaggatatgaacaggaagaaaagtatgaaattcccgaaggaccacagaaaagcagg
ctcaacagagaacagctgttgccaaagctgtttgatggatgttacttctattttggggga
accttcaaacaccatccaaaggacaacctaattaagcttgtcgctgccggtgggggccag
atcctcattagaaagcccaagccagacagtgatgtgactcaaaccatcaatacagtcgca
taccatgccaaacctgattctgatcagcacttctgcacacagtatatcatctatgaggac
ttgtctaatcatcgcccagaaagggttcggcagggcaaagtctggatggctacttccagc
tggtttatagattgtgtgatgtcctttgagttgctgcctcttgacaactga
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