Odocoileus virginianus (white-tailed deer): 110145130
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Entry
110145130 CDS
T10722
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X3
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
ovr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110145130 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110145130 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110145130 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110145130 (CPSF4)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110145130 (CPSF4)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110145130 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
110145130
NCBI-ProteinID:
XP_020760948
UniProt:
A0A6J0YGZ6
LinkDB
All DBs
Position
33:complement(35461850..35473383)
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AA seq
269 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgtgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccgttccgccacatc
agtggtgagaagacggtggtgtgcaagcactggctgcgggggctgtgcaagaagggggac
cagtgcgagttcctgcatgagtacgacatgaccaagatgcccgagtgctacttctactcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccccgagtccaag
atcaaggactgcccgtggtacgaccgcggcttctgcaagcacggccccctgtgcaggcac
cggcacacgcggagagtcatctgtgtcaattacctcgtgggattctgcccagaggggccc
tcctgtaaattcatgcaccctcgatttgaactgccgatgggaaccaccgagcagccccca
ctgccgcagcagacgcaaccacccacgaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaaccagcagagaaccccgcag
gtcatcggggtcatgcagagtcaaaacagcagtgcaggcaaccgaggaccccggccgctg
gagcaggtcacctgctacaagtgtggtgaaaaaggacactacgccaacagatgcaccaaa
gggcacttggccttcctcagcggacagtga
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integrated database retrieval system
