Odocoileus virginianus (white-tailed deer): 110145307
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Entry
110145307 CDS
T10722
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110145307 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110145307 (HCFC2)
03029 Mitochondrial biogenesis [BR:
ovr03029
]
110145307 (HCFC2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
110145307 (HCFC2)
Mitochondrial biogenesis [BR:
ovr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
110145307 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_2
Kelch_FKB95
Beta-prop_TYW4
NANM
DUF5944
Motif
Other DBs
NCBI-GeneID:
110145307
NCBI-ProteinID:
XP_020761193
UniProt:
A0A6J0YHP0
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Position
23:complement(45994751..46062856)
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AA seq
793 aa
AA seq
DB search
MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTVTNQWF
LPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPSS
GSPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIP
VTKGIVPSPRESHTAVIYCKRDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGT
VPLPRSLHTASVIGNKMYVFGGWVPHKGENIETSPHDCEWRCTSSFSYLNLDTAEWTTLV
SDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAP
SQVQLIKATTNSFHVKWDEVPTVEGYLLQLNTDLPYQAASSDSSASPNMQGVRMDPHRQG
SNSIIPNSISEIVNSVKSEHTAMKGTSVKNKPDLKASTDSNASSHSSLAANASNHNSCVV
DMLRKNEGPHTSADIGVLSSCLDLRTVIPETSVSSTVSSAQTMVTQQTIKTESSSTNGAV
VKDETSLTTFSTKAEVDETCALPATKISRVEAHAAMVPFSKETPSNPVAMVKAGERQWCD
VGIFKNNTALVSQFYLLPKGKQSISKIGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCG
IGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQ
IQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVR
WLQAQSLNFREGS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccagcctcctgaactggaggcgggtttcctccttcacggggccggttccc
cgcgcccggcacggacaccgagcggtggccatccgggagctgatgatcatctttggcggg
ggcaacgagggcatcgcggacgagctgcacgtctacaacaccgttacaaatcagtggttt
ctaccagctgttagaggagacatcccgccaggctgcgccgcccatggatttgtctgtgat
ggcaccagaatattagtgtttgggggaatggttgagtatggaagatacagcaatgagtta
tatgagttacaagcaagtcgttggttatggaaaaaagtgaaaccccatcccccttcttct
ggttcacctccttgtcctcggctgggacatagcttctctttatatggtaacaaatgctat
ttatttggtggactggcaaatgaaagtgaagattcaaacaataatgttcccagatattta
aatgacttctatgagttggagctacagcatggttctggtgttgtgggttggagcattcca
gtgactaaagggattgtgccttcgccaagagaatcccacacagctgttatatattgtaaa
agagattctggaagtcctaaaatgtatgtttttggtggaatgtgtggtgctcgcctggat
gatctatggcagcttgacttagaaactatgtcatggtcaaaaccagaaactaaagggaca
gtgccgcttccacgaagccttcatacagccagtgttataggaaataagatgtatgtattt
ggtggatgggttccacataagggggagaatattgagacttcacctcatgattgtgaatgg
aggtgtaccagttcattttcttacctgaatcttgatacagcagaatggaccactctagta
tcagattctcaggaagataaaaaaaattcaagaccaagaccaagagctggacactgtgct
gttgcaattggcactcgattatatttttggagtggaagagatggctacaaaaaagcactg
aatagtcaagtttgctgcaaggatctttggtatcttgatactgagaaaccaccagcacca
tcacaagtacagttgatcaaagccaccaccaactctttccatgtcaagtgggatgaagtg
ccgacagtcgagggctaccttttgcagctgaacacggacttgccataccaagccgcatca
tcagattcctcggcatcaccaaacatgcaaggagtcaggatggatcctcacagacaaggc
agtaatagcatcattcctaacagtatcagtgaaatagtgaacagtgtaaaatctgaacat
acagccatgaaaggaacttcagtgaaaaacaaaccagatctcaaagcatcaactgattct
aatgcctcttcacattcatctttggcagctaatgcttctaatcataatagttgtgtggtg
gatatgctaaggaaaaatgaaggtcctcacacttcagcagatataggtgttctaagtagt
tgcctggacttaagaacagtaatccctgaaacttctgtatccagtactgtttccagcgca
caaactatggtaacccagcagaccattaaaactgaatcatccagtacaaatggggcagtt
gttaaagatgaaacttcactaacaacattcagtaccaaagctgaagttgatgaaacgtgt
gcactgcctgcaactaagataagccgtgtggaggcacatgctgccatggtgccgttttct
aaagagactccttcaaatccagtggccatggtgaaagcaggagaacgacagtggtgtgac
gtaggaatttttaaaaataatacagctttggtgagccagttttatttgctgccaaaaggg
aagcaaagcatttcaaagataggaaatgcagacgtacctgactacagtttacttaagaaa
caagatcttgttccaggcacaggatacagattcagggttgctgccatcaatggttgtgga
ataggccctttcagcaaaatcagtgaatttaaaacttgtattcccggttttcctggagct
ccttctgcagtcagaatttcaaagaatgtcgagggcatccatctttcctgggaacctcca
acttcaccttctggaaatattttggaatattcagcctacttggctatccgcacagcacaa
atacaagataatccaagtcaacttgtgtttatgaggatttattgtggtcttaagacatca
tgtatagtaactgctgggcagcttgcaaatgcacatattgattatacatccaggcctgcc
attgtgttcaggatatcagcaaagaatgaaaagggatatggaccagctacacaagttcga
tggcttcaagcccaatctttaaactttagagaaggaagctga
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