Odocoileus virginianus (white-tailed deer): 110145514
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Entry
110145514 CDS
T10722
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110145514 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110145514 (COL25A1)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110145514 (COL25A1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110145514
NCBI-ProteinID:
XP_070308368
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Position
21:complement(46430603..46934118)
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AA seq
665 aa
AA seq
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MLVKKQAVKGGGREPGSEDRSPAGQPCARPVSLCAALATLLSVVAVMSCLYLGVKTNDLQ
ARIAALESAKGDPSIRLLPDCVDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQI
LTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ
KGSVGVPGIPGMNGQKGEPGLPGAVGQNGIPGLKGEPGEQGLKGDAGENGPKGDTGEKGD
PGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGIKGER
GEAGPPGRGDRGEPGAPGPKGDRGDKGDSGALGPRGPPGQKGDPGATEIIDYNGNLHEAL
QRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGLKGSKGDMGDPGMPGEKGGI
GLPGLPGANGMKGEKGDSGLPGPQGPSVIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNG
VKGLKGEAGQKGDRGPLGLPGASGLDGKPGARGSDGPMGPHGPAGPKGERGEKGAMGEPG
PRGPYGLPGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMP
GCWQK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcaagcggtgaaaggagggggccgggagccgggctcagaggaccgg
agcccagccgggcagccttgtgcccgccccgtgtccctgtgcgcagccctggccaccctc
ctgtctgtggtggccgtgatgtcttgtctgtacctgggcgtgaaaaccaacgacctccag
gcgaggatcgctgccctcgagtctgccaaaggagacccttccatccgtctgctgcctgat
tgtgtggatcagctcaaagctatggtgcaagagaaagtggagcgacttctggctcagaag
tcctatgaacatatggctaaaataagaatcgcgagagaagcgccttcagaatgcaattgc
ccggcaggtcctccagggaaacgaggtaagaggggccgaagaggagaatctggtcctcct
ggtcagcccggtcctcagggccctcctggtccaaaaggtgacaagggagaacagggtgat
cagggacctcggggtctgccaggcttccccacagttgctgctctgcacagtaaccagatc
ctcaccgtcaagggtgaccaaggtcaggctgggccgccaggcccgccaggccccccgggc
ccaagagggccgcctggggacacagggaaggatggcccccgcggaatgccaggcgtgccc
ggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctggggcctccaggacaa
aagggttctgttggagtacctggaattccggggatgaatggacaaaaaggtgaacccggg
ttacctggagcagtaggacagaatggaataccagggctaaagggagaacctggagaacaa
ggattaaagggagatgctggagagaatggccccaaaggtgacacaggcgaaaagggtgac
cctggatcatctgctgcaggaattaagggagaacccggagaatctggtcgtccagggcaa
aagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaaccaggt
ttcattggtcctcaaggagaaccaggcttaccaggcttaccaggaataaagggcgaacgt
ggggaggcagggcctcctggacgaggggaccgaggggagcctggagcccctggaccaaag
ggcgatcgtggagacaaaggggactctggagccctgggaccaaggggtccacctggtcag
aagggagatccaggagccaccgaaatcatagactacaatggcaacctccacgaagccttg
cagaggattaccacgttaacagtcacgggtccccctggaccacctggacctcaaggactg
caagggccaaagggagagccaggatccccgggagtcccaggagttgatggagagcaggga
ctcaaaggctcaaagggagacatgggggacccaggtatgccaggtgaaaaaggaggaatt
ggacttcctggactaccgggtgccaatggaatgaaaggagaaaaaggagactcaggattg
ccaggtccacagggcccttccgtcataggcccaccaggcccaccaggtccccatggccca
ccaggccccatgggaccccatggacttcctggaccaaagggtgaaccagggttaaatggt
gttaaaggattgaagggtgaagcaggtcaaaagggtgacagaggaccccttggtcttcca
ggagcatctggcttagacggaaagccaggagcccggggttcagatggccctatgggaccc
catggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagccggga
ccccgagggccgtacggtctgcccggtttccctggtccacgaggcgagaagggtgacctg
ggagaaaagggggaaaagggattccgtggcgttaagggggaaaaaggggagccaggccag
cctggcctggatgggctggatgccccttgccaattggggccagatggattacccatgcct
ggctgttggcaaaagtga
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