Odocoileus virginianus (white-tailed deer): 110145592
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Entry
110145592 CDS
T10722
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03410
Base excision repair
ovr04140
Autophagy - animal
ovr04217
Necroptosis
ovr04613
Neutrophil extracellular trap formation
Brite
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
110145592 (HMGB1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110145592 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
110145592 (HMGB1)
Exosome [BR:
ovr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110145592 (HMGB1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110145592
NCBI-ProteinID:
XP_020761640
UniProt:
A0A6J0XM80
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Position
8:complement(75882748..76012092)
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AA seq
215 aa
AA seq
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MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggctaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgac
aagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgttaaggccgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gaagatgaagaggatgaggaggaggaagaagatgatgatgatgaataa
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