Odocoileus virginianus (white-tailed deer): 110145831
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Entry
110145831 CDS
T10722
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04140
Autophagy - animal
ovr04148
Efferocytosis
ovr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110145831 (VPS16)
04148 Efferocytosis
110145831 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110145831 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110145831 (VPS16)
Membrane trafficking [BR:
ovr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110145831 (VPS16)
Hops complex
110145831 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
110145831
NCBI-ProteinID:
XP_020761954
UniProt:
A0A6J0YJV3
LinkDB
All DBs
Position
9:48148291..48175281
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKPA
SARPVLEIYSASGVPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TALCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKEKAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRVFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILSGQNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacaccgcgaactggaacccactcggggactctgctttttaccggaaatat
gagctgtatagcatggactgggacctgaaggaggaactgagggactgcctcgtggctgct
gcaccctatgggggccccattgcactgctgaggaacccctggaggaaggagaagcccgct
agtgcccggccagttctcgagatctactcagcttccggggtgcctctggccagtctgttg
tggaagagtgggcccgtggtgtccctgggctggtcagctgaggaggagctgctctgcgtg
caggaagacggagttgtgctggtttacgggctgcacggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggagcccaccgcttcaccctcagtgccaacgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccctcatgctgg
accgcactgtgccaggaccgagtggcacacattctcctggctgtaggacctgatctttac
ctcctggaccatgcagcctgctctgcggtgacaccccctggcctggccccaggagtgagc
agcttcctgcagatggctgtctccttcacctacagacacctggcgctcttcacagacaca
ggctacatctggatggggacagcatctctcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgcagccgtccacgcagcaaggagaaggcc
gttgtggtggcctgggagaggcggctgatggtggtgggcgacgcaccggagagcatccag
ttcgtgctggatgaggactcctacctggtgcctgagttggacggggtccgagtcttctcc
cgcagtacccacgagttcctgcacgaggttccagtggccagtgaggagatctttaaaatt
gcctcgatggcccctggagcgctgttgttggaggctcagaaggaatatgagaaggagagc
cagaaggcggatgagtacctgcgggagatccaggagctggggcagctgccgcaggctgtg
cagcagtgtatcgaggctgcaggacacgagcactggccagacatgcagaagagtctgctc
agggcggcctccttcggaaagtgtttcctggacagatttccacctgacagctttgtgcgc
atgtgtcaggaccttcgtgtactcaatgccgttcgggactatcacattggaatccccctc
acctatagccaatacaagcaactcactatccaggtgttgctagacaggcttgtgttgcgg
aggctttaccctctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcagaatcctggcccactgggcctgctacaaggtacaacagaaggatgtgtctgac
gaggacgttgctcgggccattaatcagaagctgggggacacgcctggtgtctcctactct
gacattgctgcacgagcctatggctgtggccgcacggagctggccatcaagctgctggaa
tacgagccacgctctggggagcaagttccccttctcctgaagatgaagaggagcaaactg
gccctgagcaaggccatcgagagtggggatactgatctggtgttcacagtgctgctgcac
ctgaagaatgagctgaaccgaggagattttttcatgacgcttcggaaccaacctatggcc
ttaagtttgtaccgacagttctgtaagcatcaggagctggagacgctgaaggacctttac
aaccaggatgacaaccaccaggagctgggcagcttccacatccgagccagctatgctgca
gaggagcgaattgaggggcgagtcgcagctctacagacggcagccgacgccttctacaag
gccaagaatgagtttgcagccaaggctacagaggatcagatgcggctcctacggctgcag
cggcgcctagaagatgagctcgggggccggttcttagacctgtctctacatgacacggtc
accaccctcattctcagtggccaaaacaagcgcgcagagcagctggcacgtgactttcgc
atccctgacaagaggctctggtggctgaagctgactgccctggcagatttggaagactgg
gaagagctagagaagttttctaagagcaagaaatcacccattggctacctgccctttgtg
gagatctgcatgaagcaacacaataaatatgaggccaagaagtatgcttcccgcgtgggt
cctgagcagaaggtcaaggccttgcttctcgttggggacgtggctcaggctgcggacgtt
gccattgagcaccggaatgaggcggagatgagcctcgtattgtcccactgcactggagcc
acagatggggccacagccgacaagattcagcgggcccgagcacaagcccagaagaaatga
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