Odocoileus virginianus (white-tailed deer): 110145998
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Entry
110145998 CDS
T10722
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03013
Nucleocytoplasmic transport
ovr03015
mRNA surveillance pathway
ovr03040
Spliceosome
ovr05014
Amyotrophic lateral sclerosis
ovr05168
Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110145998 (ALYREF)
TREX complex
110145998 (ALYREF)
Spliceosome [BR:
ovr03041
]
Complex C
Other components
EJC/TREX
110145998 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110145998 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110145998
NCBI-ProteinID:
XP_070335831
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All DBs
Position
17:complement(47141688..47145506)
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggatatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggtggccgcggcggc
ggggcccaggccgccgcgcgagtgaaccgaggcggcggacccattcgaaatcggccggct
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcctgacaaatggcagcatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggagacaggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaatttggaactctgaagaaggcggctgtacactacgac
cgatctggccgcagtttaggaacagctgacgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggcgtccctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacgcagcggagacctgcacagagtgtaaacagaggtgggatg
actagaaaccgtggttcaggaggttttggtggcggcggtggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggcaccggcaggagttcaaagcagcagctttccgca
gaagaattagatgcccagctggatgcttacaatgcaagaatggacaccagttaa
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integrated database retrieval system
