Odocoileus virginianus (white-tailed deer): 110146749
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Entry
110146749 CDS
T10722
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03022
Basal transcription factors
ovr03420
Nucleotide excision repair
ovr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110146749 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
110146749 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110146749 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110146749 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110146749 (GTF2H1)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110146749 (GTF2H1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110146749 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
110146749
NCBI-ProteinID:
XP_020763375
UniProt:
A0A6J0YNG5
LinkDB
All DBs
Position
28:complement(23913854..23945443)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLHVNAAESSSMSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIRENSN
AAIIKRFNHHSAMVLAAGLRKQEAQKEQNGEPSSIDGNSGDVDCFQPAIKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIREEMEGYTPRLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttctgttgattgtgaagaaggtgcgacagaagaagcag
gatggagctctgtacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcagatatcaaatgccagaaaatcagtccagaaggaaaa
gcgaaaattcagcttcaactggtcctgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgggatgcagtgaaagaccttcttcagcaactgctt
cccaaattcaagcggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtcatcagtgctgag
gaattctgggccaatcgtttacatgtgaacgcagcagagagttcttccatgtctaaccat
aagcaggatgttggcatttctgcagcatttctggctgatgtccgaccccagacagatgga
tgtaatggtttgagatacaatttaacatctgatatcattgagtccatttttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggaattc
tggacacgtttctttcagtcccattatttccacagggaccggctgaacacagggtcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccgctacttgacttaacagctttggaagataaaccattagatgagggc
tatggcatttcctccgtgccatctacttctaattctaaatccatcagagagaatagtaat
gctgccatcatcaagagatttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaaggagcaaaatggcgagcccagcagcattgatggaaattccgga
gatgtagattgctttcagccagcaatcaaaagggcgaagttacaagaatccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcgctgcagtatgcaaccagtcaggacatt
attaattcctttcaaagtattagagaagaaatggaaggttacacgcccaggttaactcag
gttctctccagtagtgctgccagtagcaccatcacagccctgtcccctggaggagcactg
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctatatgtggctgttggggaacttctacggcacttctggtcctgttttcct
gttaatacgccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggttagtcacatagaggagatgctccagacagcctacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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