Odocoileus virginianus (white-tailed deer): 110146918
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Entry
110146918 CDS
T10722
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110146918 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovr03041
]
110146918 (DDX46)
Enzymes [BR:
ovr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110146918 (DDX46)
Spliceosome [BR:
ovr03041
]
Complex A
U2 snRNP components
U2 related factors
110146918 (DDX46)
Complex B
110146918 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
110146918
NCBI-ProteinID:
XP_020763679
UniProt:
A0A6J0YQ26
LinkDB
All DBs
Position
3:43046773..43100338
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggagtcacgccactatcggaagcgatcagcatcacggggacgctctggaagt
cgatctagaagtcgttcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagggatagagataggaggagagagaggtctcgtagcagggataaaagaagatct
cggtccagagacaggaagcgtctgaggcgttccagaagtagagagagagatagaagtcga
gaacgaagaagatctcgaagtcgggacaggagacgttcaaggagtagaagccgaggccga
agatcccgatcttccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgaaaaagaaaaggatgctggtaactttgaccaaaataagctagaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaatcgaggagatgaaacaagggaaaaaatggagttta
gaagacgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaagagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctggtccaacg
gtcacaaaagttgtcacagttgtcacaaccaaaaaagcagtcgtagattctgataagaag
aaaggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacggctcttacaggttaccagacaaagcagagaaagcttctagaaccg
gtggatcatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattggcaaaaatgtctcaagaggaggtgaatgtatttcggttggaaatggaaggcatt
actgtcaaagggaaaggttgccccaaaccaattaaatcttgggttcagtgtggaatttct
atgaagatcttaaattctctcaaaaagcatggttatgaaaagcccacaccaatccaaacc
caggcgattcctgcgataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcctttctgttgcccatgtttagacacatcatggatcagaggtcttta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttgggccttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgtacacctggtcgaatgattgacatgttagcagctaatagtggtcgggttacaaatctc
cgaagagtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgttcgccctgacagacagacagttatgttttca
gctactttccccagagctatggaagccttggctcggagaatcctgagtaaacccattgaa
gtgcaggttggaggcagaagtgtagtttgctcggatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagctacttgaacttctaggtcattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcttcttacccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgattttaagaatgggacctgcaaacttcttgtggctacgtctgttgctgcc
cgaggcctcgatgtgaagcatctgattcttgttgtaaactatagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggctacgcatac
acttttatcacagaagatcaagctcggtatgctggagacataattaaagcccttgaactg
tcagggactgcagtgccacctgatctagagaaactctggagcgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttc
gatgagacagaacaagctttggctaatgagagaaagaagttacaaaaagctgctcttggt
ctgcaagattcagatgatgaggatgctgcggttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggcagctcctggaacatctagtgtgcctgct
cccactgcagggaatgctgagaaactggaaattgcaaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtaatgcagcaggccaccaatgcc
attctcagaggtggcaccatcctggctcccactgtgtctgcaaaaaccattgcagagcaa
cttgctgaaaagataaatgccaagctcaactatgtgcctttggagaaacaagaagaggag
agacaggacggtgggcagaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagaccgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gaatattctgaagctgcaattacaatcagaggaacgtacttcccacctggcaaagagccc
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcgaaggcagaaatcaccaggcttataaaagaagaactgatccgattgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
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