Odocoileus virginianus (white-tailed deer): 110147145
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Entry
110147145 CDS
T10722
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110147145 (TNRC6A)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110147145 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110147145
NCBI-ProteinID:
XP_020764116
UniProt:
A0A6J0YSR6
LinkDB
All DBs
Position
33:21371321..21589668
Genome browser
AA seq
1950 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQPQQQQQPQQPQPQPQPPPQAL
PRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEV
QISKNQSDINHSTSGSHYENSERGPVSSASDSSPNCKNAVVNDSPDKEAWPSVPGSDPEL
VSECMDADSASSSESERHITIMASGSAGGENDGIRNSTGLGSQNKFVVGSSSNNVGHGSS
TGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGA
WPVLENNGLALKGPVGSGSSGINIQCSTLGQMPNNQSINSKVGGASTHGTWGSLQETCES
EVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWRVSTMNH
PQIQAPSVVNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATL
MQPGINGPVGTNFQVNTNKGGGVWESGAVNSQSASWGNGANSGGSRRGWGTPAQNTGTNI
PSVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSVWAKTGGAVES
EGSTESTGRLEEKGTGESQSRDRRKMDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNT
AWDTETSPRGERKTDNGTEAWGSSATQTFNSGACVDKTSPSSNDTSSVSGWGDPKPALRW
GDSKGSSCQGGWEDDSAATGMVKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQGWSVS
ASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDE
SSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPAAGKPPGTGWLG
GPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSR
SDQQAQVHQLLPSAGAISNKEASSGSGWGEPWGETSTPATTVDNGTSAWGKPVDSGPSWG
EPIAAASSTSTWGSSSVGPQTLSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMW
NSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNIS
FSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSME
RSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNP
SMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPL
FGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQ
MMQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFP
IGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFV
PYDYMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYV
TPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNHSVPLSSTAQSA
SARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSSWDNSPL
RVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHL
NLPHGSALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPSW
QSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPP
SSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatcagcagccgcagcagcaacagccg
cagcagcagcagcaaccgcagcagccgcagccgcagccgcagccgccaccacaggccttg
cctcggtatccccgggaagtaccacctcgatttcgccaccaggaacataagcagcttcta
aagaggggtcagcattttcccgtcatagcagcaaacctgggatctgctgttaaagtgtta
agcagccagtcagaaagcagtgctttaacaaatcaacagccacaaaataacggagaggtg
cagatcagcaaaaaccagtcagatataaaccacagtacttcaggatcccattatgaaaat
tcagagcggggacctgtgtcttctgcaagtgactctagtccaaactgtaagaatgctgtt
gtgaacgactcccctgacaaagaagcatggccctcagtccctggcagtgatccggagttg
gtttcagaatgtatggatgctgattctgcctccagttctgaatcagagcgacacatcact
atcatggcttcagggagtgcaggtggtgaaaacgatggcattcggaacagcactggactc
ggatcccaaaacaagtttgtggttggtagcagcagcaataatgtgggccatggaagcagc
actgggccatggggtttttcccatggagccataataagcacatgtcaggtgtctgtggat
gctcctgaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcactgtaagt
tcttcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcc
tggccagtattagagaacaacggacttgccctaaaagggcctgtagggagtggtagttct
ggcatcaatattcagtgcagtaccttaggccagatgcctaacaatcagagtattaactct
aaagtgggtggcgcttccacccatggtacctggggaagccttcaggaaacttgtgaatct
gaagtaagtggtacacagaaggtttcattcagtggtcaacctcaaaatattaccactgaa
atgactggaccaaataacactactaactttatgacctctagtttaccaaactccggttca
gtacagaataatgaactgcctagtaatacaggggcctggcgtgtgagcacaatgaatcat
cctcagatacaggctccctcggttgtaaacggcacttccctttctcaccttagcaatgga
gagtcaaaaagtggaggctcttacggtactacatggggtgcctatggttctaattactct
ggagacaaatgttcaagccctaatggccaagctaatggtgacactgtgaacgcaactcta
atgcagcctggcataaacgggcctgtgggcactaactttcaagttaacacaaataaagga
ggcggcgtgtgggagtctggagcagtgaattcccagagtgcatcctggggaaatggtgca
aattctggaggaagtcgaagaggatggggaactcctgcacaaaacactggcactaatata
cccagcgtggaatggaacaaactgcctagcaatcagcattccaatgacagtgcaaatggc
aacggtaagaagtttacaaacggatggaaatctactgaggaagaggatcagggttctgcc
acatctcagacaaatgagcaaaacagtgtgtgggccaaaacgggaggtgcagtggagagt
gaaggtagcacagaaagcactggacgcctcgaggagaaagggactggggaaagtcagagt
agagacagaaggaaaatggatcagcacacgttactccaaagcattgtaaacagaacggac
ttagatccacgtgtcctgtccaactctggttggggacagactcctattaagcagaatact
gcctgggataccgaaacatcacctagaggggagagaaagactgacaatgggacggaggcc
tggggaagctctgcaacacagacttttaactcaggggcatgtgtagataagactagccct
agtagtaatgatacctcatctgtatcggggtggggagatcccaaacctgctctgaggtgg
ggagattccaaaggctcaagctgccaggggggatgggaagatgactctgctgctacagga
atggtcaagagcaatcagtgggggaactgcaaagaagagaagtccgcatggaatgattcg
caaaagaacaaacagggatggggtgatggacaaaagtcaaaccaagggtggtccgtctct
gccagtgataactggggagaaacttccaggagtaaccattggggtgaggctaacaagaag
tctagctcaggaggtagtgacagtgataggtctgtttctggttggaatgaactcggtaaa
actagttcttttacatggggaaataacattaatccaaataattcatcaggctgggacgaa
tcttctaaaccgaatccttcccagggatggggagaccctccaaagtctaatcagtctcta
ggttggggagattcatcaaagccagtcagttctccagactggaacaagcaacaagacatt
gtcggatcttggggcatcccgccagcagcaggcaaacctcctggtacaggctggctggga
ggacctatgccagccccagcgaaagaggaagaacccaccggctgggaggagccatcccca
gaatccatacgtcgcaaaatggagattgacgacgggacttcagcttggggagatcccagc
aaatacaactacaaaaatgtgaacatgtggaacaaaaatgtcccaaatggcagcagccgc
tcagaccagcaagcacaggtacaccagttgctaccgtctgcaggtgccatctcaaacaaa
gaggcaagcagtggctccggctggggtgagccctggggggagacttcaactccagccaca
actgtggataatggtacttcagcctggggtaaacccgtagacagtgggcctagctggggc
gaacccattgctgcggcatccagtacatccacgtggggctccagctctgttggtccacaa
acattaagcaaatctgggccaaaatctatgcaagacggctggtgtggtgatgatatgccc
ctgcctggaaatcgccccactggctgggaagaggaagaggatgtagagattggaatgtgg
aatagtaattcatctcaagagcttaattcatctttaaattggccaccatatacaaagaaa
atgtcttcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaaggt
ggaaataaacaagaagaagcatggataaatccatttgttaaacagttttcaaatatcagt
ttttcgagagactcgccagaagaaaatgtacagagcaataagatggacctttctggagga
atgttacaagacaaacgaatggagatagataaacatagcctaaatattggtgattacaat
cgaacggtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatggag
cgcagtccttattttgataaggatggcattgtagcagatgaatcccaaaacatgcagttt
atgtccagtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggccctg
ggctccatagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaatccc
agtatgttcggtgtcgggaacacagcagcacaaccccggggcatgcagcagcctccagca
cagcctctcagctcatctcagcctaatctccgtgctcaagtgcctcctccattactctcc
cctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctc
tttggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttctcag
atctcccagttacagcgattgttagcgcagcagcaaagggcgcagagtcagagaagcgtg
ccttctgggaaccggcagcagcaagaccagcagggtcgacctcttagcgtgcagcagcag
atgatgcaacaatctcgtcaacttgatccaaacctgttggtgaagcaacaaactccgcca
tctcagcagcagtcactccatcagccagccatgaagtctttccttgaaaatgtcatgccc
cacactacacctgagctgcaaaaagggccatcaccaataaatgctttcagcaacttccct
ataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagccacag
tcaagactaaggaagtggactacagtggacagcatttctgtgaacacatctttggatcaa
aactccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctccatttgtt
ccctatgactatatgaacagcagtacttcaccagccagtcctccaggttcaataggggat
ggctggccacgtgccaaatcgcctaacggctctagcagtgttaattggccaccagaattt
cgccctggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttacgtc
actcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccacctc
agggacaggaacagtgggtcgtcctcatccttgaacaccacgctgccttcaactagtgcc
tggtcatccattcgtgcctccaaccacagcgttcccctcagcagcacagcacagagcgct
tcagccagaaatagtgattccaaattgacatggtcccctggttcagttacaaacacctct
ctggctcatgagctgtggaaggtccctctgccacctaaaaacatcactgctccgtcccgc
ccacctccgggactgactggtcagaagccacccttgtcttcgtgggataattctcccctt
cgagtaggtggaggatggggaaattctgacgccaggtataccccaggttccagctggggt
gagagcagctcagggagaataacaaattggcttgttctaaaaaaccttacacctcagatt
gacggctcaactctgcgtactctgtgcatgcagcacggcccactgataacattccacctg
aacctcccacacggaagcgctttggtccgctacagttcaaaagaagaggtagtgaaggca
caaaagtctctgcacatgtgtgtactggggaacactactattcttgctgagtttgccagt
gaagaggagatcagtcgtttctttgcacaaagtcagtctctgaccccttctcccagctgg
cagtctctcgggtccagccagagccggctgggctccctcgactgttcccactcattctcc
agccggaccgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagac
cttcatggcacttccctctgggggaccccacattattccacaagcctgtggggtcctccc
agcagcagcgacccccggggaattagcagcccatcccccattaatgcttttctttctgtt
gaccacctgggtgggggtggagagtccatgtaa
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