Odocoileus virginianus (white-tailed deer): 110147310
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Entry
110147310 CDS
T10722
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04142
Lysosome
ovr04144
Endocytosis
ovr04721
Synaptic vesicle cycle
ovr04961
Endocrine and other factor-regulated calcium reabsorption
ovr05016
Huntington disease
ovr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110147310 (CLTC)
04142 Lysosome
110147310 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
110147310 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
110147310 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110147310 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
110147310 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110147310 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ovr04147
]
110147310 (CLTC)
Membrane trafficking [BR:
ovr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110147310 (CLTC)
Exosome [BR:
ovr04147
]
Exosomal proteins
Proteins found in most exosomes
110147310 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
110147310
NCBI-ProteinID:
XP_020764414
UniProt:
A0A6J0YS11
LinkDB
All DBs
Position
17:9698976..9763572
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPAQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaacattggcttcagtaccttgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagaacaggcccaggtggtaattattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagccagcaaagtaatt
gcactaaaagctgggaaaactctccagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgcc
cttgtcacggataatgcagtttatcattggagcatggaaggagagtcgcagccggtgaaa
atgtttgatcgccactcgagcctcgcagggtgccagattatcaattatcgaaccgatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtaggagct
atgcagttatattccgtagataggaaagtgtctcagcccattgaaggacacgcggctagc
ttcgcacagtttaagatggaaggcaatgcagaagagtcaacgctgttttgttttgcagta
cggggccaagcgggagggaagttgcatatcattgaagttggcacaccaccgacagggaac
cagccgtttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
ccggttgcgatgcagatcagtgaaaagcatgatgtagtattcttgattactaagtatggt
tacatccacctctatgaccttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacgatctttgtcaccgcgcctcatgaagccacagcgggaataatcggagtaaacaga
aagggacaggttctctcagtatgtgtggaagaagaaaacataatcccttatatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtggctgctaatgcaccaaagggaattcttcgtaccccagacaccatccgtcgg
ttccagagtgttccagctcagccaggtcaaacttcacccctacttcagtactttggaatc
cttttggaccagggtcagctaaataaatatgaatccttagaattgtgtaggcctgtactt
cagcaggggcggaaacagcttttggagaagtggttaaaagaagataagctggaatgttct
gaagaactaggagacctggtgaaatctgtggaccctacattggcacttagtgtgtactta
agggctaacgttccgaataaagtcattcaatgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatactccagactggatctttctactgagaaat
gttatgcgtatcagtccagatcaggggcagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcacccagattgtcgatgtgtttatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgcgctgaagaataatcgcccatctgaaggtccttta
cagacgaggttgcttgagatgaaccttatgcatgcacctcaggttgcagatgctattcta
ggcaatcagatgttcacgcattatgaccgggctcatatcgctcagctgtgtgaaaaggct
ggcctcctgcagcgcgcgttagaacacttcactgacttgtatgatatcaagcgtgcggtc
gttcatacccatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtg
gaagactccctggaatgtctcagggccatgctgtctgccaatattcgtcagaatctacag
atctgtgtacaagtggcttctaagtatcacgaacaactgtccactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtcttttttattttttgggatccattgttaac
tttagtcaagacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcgaagctaacagatcagttaccacttatcattgtgtgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcagaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggttattgggggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggccagaattcatgagggctgtgaagagcctgctactcacaatgcactagcc
aaaatctacatagacagtaataacaatccagagaggtttcttcgggaaaatccttactat
gacagtcgtgttgttggaaagtattgtgagaagagagatccgcatctggcctgtgttgct
tacgagcgtggccaatgtgatctggagcttatcaatgtctgcaatgagaattccctcttc
aaaagtctttctcgctatctggtacggcggaaggacccagaattgtggggtagtgtgctg
ctggaaagcaatccttacaggagacccctcattgatcaggttgtacagacagccttgtct
gaaactcaggaccctgaggaagtgtcagtaactgtcaaggcctttatgacagcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacagaaacctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacccgtgtt
atggagtacattaaccgcttggataattatgatgccccagatattgccaacatcgccatc
agcaatgagctctttgaagaagcatttgccattttccggaaatttgatgtcaatacctca
gcagtgcaggtcttaatcgaacatattggaaacttggatcgggcatatgagtttgctgag
cgctgcaatgaaccggcagtctggagtcagctcgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccatcgattcttacatcaaagcagatgatccttcatcgtacatggaagtt
gttcaggccgccaatactagtggaaactgggaagagctggtaaagtacttgcagatggcc
cgcaagaaggctcgtgagtcctatgtggagacagaattgatctttgcactggctaaaaca
aaccgcctagcagagttggaagagttcatcaatgggccaaataatgctcatatccagcaa
gttggtgaccgttgttatgatgagaaaatgtatgatgctgctaagttgttgtacaataat
gtttccaattttggacgcttggcatctactctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagccaacagtactcgaacatggaaagaggtctgctttgcctgt
gtggatgggaaggagttccgtctcgctcagatgtgtgggcttcatattgtagtacatgca
gacgagttggaggaacttatcaactactatcaggatcgtgggtattttgaagagctgata
accatgttggaagcagcactgggacttgagcgagctcacatggggatgttcactgaatta
gctattctgtattctaagtttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagcccatctttgggcagaa
ttggtgtttttgtatgacaaatatgaagaatatgataatgccataattaccatgatgaat
catccgactgatgcatggaaagaagggcagttcaaagacatcattaccaaggttgccaat
gtggagctatactacagagcaatacaattctacttagaattcaagccactgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccctatttgcgttcagttcagaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctg
agaacatcaatagatgcttatgacaactttgacaatatctcacttgctcagcgtttggaa
aagcatgaactcattgagttcagaagaattgctgcttacctcttcaaaggcaataatcgc
tggaaacagagtgtagagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgaattggctgaagagctcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcgtgtctctttacttgttatgatcttttaaggccagat
gttgtcctggaaactgcgtggaggcacaatatcatggattttgccatgccctatttcatc
caagtcatgaaggaatacttgacaaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagaatcactgagaaaagaggaagaacaagctacggagacacaacctattgtt
tatggccagccccagttgatgctgacagcaggacccagcgttgcagtccctgcccaggcg
ccgtttgggtatgggtacactgcaccaccctatgggcagccacagcctggctttgggtac
agcatgtga
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integrated database retrieval system
