Odocoileus virginianus (white-tailed deer): 110147562
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Entry
110147562 CDS
T10722
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04020
Calcium signaling pathway
ovr04080
Neuroactive ligand-receptor interaction
ovr05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110147562 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110147562 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
110147562 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ovr04030
]
110147562 (PTAFR)
G protein-coupled receptors [BR:
ovr04030
]
Rhodopsin family
Others
Platelet activating factor
110147562 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Motif
Other DBs
NCBI-GeneID:
110147562
NCBI-ProteinID:
XP_020764759
UniProt:
A0A6J0YSY7
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Position
30:complement(38754542..38806674)
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AA seq
382 aa
AA seq
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MLSAAPTSSSASLSPPGPLSLQFLSNRQDPMTSSHFQPIAMEPNNSFRVDSEFRYTLFPI
FYSIVFVLGVIANSYVLWVFANLYPSKKFNEIKIFMVNLTMADLLFLVTLPLWIVYYYNH
GDWILPKFLCNVAGCFFFINTYCSVAFLAVITYNRFQAVTRPIKTAQATTRKRGILLSLI
IWVSIVGAASYFFVLDSTNKERSKSGSGNITRCFEHYEKGSIPVLIIHIFLVFSFFLVFL
IILFCNLVIIRTLLTQRVQMQRNAEVKRRALWMVCTVLAVFIICFVPHHLVQLPWTLAEL
GFQDTDFHQAINDAHQVTLCLLSTNCVLDPIIYCFLTKKFRRHLTEKFYSMRESRKCSRA
TSETGTEVVLQLKDGPVKSLKN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggcggcccccacctcctcctcagcctctttgtcacctcctggaccactgtcc
ctgcagtttctcagcaacaggcaggatcctatgaccagcagccacttccagcccatagcc
atggagccaaacaattcctttcgtgtggactccgagttccgatacaccctcttcccaatt
ttttacagcatcgtctttgtgctgggggtcattgctaacagctatgtgctgtgggtcttt
gccaacttgtacccttccaagaaattcaacgagataaagatcttcatggtgaacctcacc
atggctgacctgctcttcctggtcaccctgcccctgtggatcgtctactattacaaccat
ggagactggattcttcccaaattcctgtgcaacgtggctggctgcttcttcttcattaac
acctactgctcagtggccttcctggctgtcatcacttacaaccgcttccaggcagtgaca
aggcccatcaagactgctcaggctaccacccgcaagcgtggcatccttctgtccctgatt
atctgggtgtccattgtgggtgcagcatcctacttcttcgtcctggactcgaccaacaag
gagcgcagcaagagcggctcgggcaacatcacacgctgctttgaacattacgagaagggc
agcatcccagtcctcatcatccacatcttcctcgtgttcagcttcttcctcgtcttcctc
atcatcctcttttgcaacctggtcatcatccgcacgctgctcacgcagcgggtgcagatg
cagcgcaatgccgaggtcaagcgccgggcgctctggatggtctgcacggtcctggctgtg
ttcatcatctgcttcgtgccccaccaccttgtgcagctgccctggaccctggccgagctg
ggcttccaggacaccgacttccaccaggcgattaacgatgcgcatcaggtcactctctgc
ctccttagtaccaactgcgtcttagaccccattatctactgtttcctcaccaagaagttc
cgcaggcacctcacggagaagttctacagtatgcgcgagagccggaagtgctcccgggcc
acctcggagacgggcacggaagtggtcctgcagctcaaagatggccctgtcaaatccctc
aaaaattag
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