Odocoileus virginianus (white-tailed deer): 110147597
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Entry
110147597 CDS
T10722
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr04714
Thermogenesis
ovr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110147597 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110147597 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110147597 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110147597 (ARID1A)
03021 Transcription machinery [BR:
ovr03021
]
110147597 (ARID1A)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110147597 (ARID1A)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Helix-turn-helix
ARID
110147597 (ARID1A)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110147597 (ARID1A)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110147597 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110147597
NCBI-ProteinID:
XP_020764846
UniProt:
A0A6J0YUY6
LinkDB
All DBs
Position
30:37548408..37616835
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQQREEAGGEAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGG
GGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAAL
QSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGA
AAAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAAGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHH
APMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG
QPYGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ
QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQPSPTPYPSQQS
STQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPP
PQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSP
GVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAV
PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGG
QMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGG
QMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKSQETAV
AMHVAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSA
GMAASPEMMGLGDVKLTPASKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPE
RKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSG
SMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTF
QKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDP
YSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGLGPEGNMGTGAPQPNLMPSNPDSGMY
SPSRYPPQQQQQQQRHDSYGNQFSAQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPP
AKRHEGEMYSVPYSAGQGQPQQQQLPPAQPPPANQQQAAQPPPQQDVYNQYGNAYPATAA
TATERRPAGGPQNQFPFQFGRDRVSAPPGSNTQQNMPPQMMGGPIQASAEVAQQGTMWQG
RNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAP
VPPMTRPPPANYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV
PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPGRFSKASSPAPVEGEEEEDLLDPKLEEEEEEEVIENDEEMAFSGKDKAASENS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPSRPHVPCPPAPRKYVTAVEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSST
LTEEGAKSVEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
ICVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcagcagcagcgggaggaggcggggggcgag
gcggcggcggcggagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccc
gccgtggggccgccgcagccactgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaagaactcgaac
gggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggcggt
ggcggcggcagcagcgacggggtgggggcgcctcctcactcagccgcggccgccttgccg
cccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtcgccgccgcc
gcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcgctg
cagagcggcggcggcggcgggggcctggagccctacgcggggccccagcagaactcgcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
gcggcggcggcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctca
gcggccgcagggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggtggcggaccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgct
gctgctgcggcggcggcggccgcggccgcctcgggaggggcccaacaaaggagccaccac
gcgcccatgagccctgggagcagcggcggcggggggcagccgctcgcccggaccccgcag
ccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaac
ccatactcgcaacaacagggacctccatcaggaccgcagcaaggacatgggtacccaggg
cagccatatgggtcccagaccccacagcggtacccgatgaccatgcagggccgagcgcag
agtaccatgggcggcctctcttatgcacagcagattcctccttatggacagcaaggcccc
agcgggtatggtcagcagggccagactccgtattacaaccagcaaagtcctcacccccag
caacagcagccgccctattcccagcagccaccgtcccagaccccccatgcccagccttcg
tatcagcagcagcctcagtctcagccaccgcagctccagtcctctcagcctccgtactcc
cagcagccatcccagcctccccatcagccgtccccgactccatacccctcccagcagtcc
agcacccagcagcacccccagagccagcccccctactcacagccgcaggcacagtctcct
taccagcagcagcaacctcagcagccagcatcctcgacgctttcccagcaggctgcgtac
cctcagccccagtctcagcagtcacagcaaactgcctactcccagcagcgcttccctcca
ccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacc
tccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccttcaagcttg
cctgatctgtctggttcaatagatgatctccccatggggacagaaggagctctgagccct
ggagtgagcacatcagggatttccagcagccaaggggagcagagtaatccagctcagtct
cctttctctccccacacctcccctcacctgcctggtatccgaggcccctccccgtcccca
gttggctctcctgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtg
ccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatcct
tctatgaaccaatcaagcattgcccaagatcgaggttacatgcagaggaacccccagatg
ccccagtacagttcccctcagcccgggtcagccttatctccacgtcagccttccggagga
cagatgcacacaggcatgggctcctaccagcagaactccatggggagctatggtccccag
gggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttgccc
aatgctaactaccccagtgcaggcatggctggaagcatgaaccctatgggtgctggaggt
cagatgcatgggcagcctggcatcccaccttatggcacactccctcccgggaggatgagt
cacgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggtt
gggtcggggatgtgtccccctcccgggggcatgaaccggaaaagtcaagaaactgctgtc
gccatgcatgttgctgccaactctatccaaaacaggccaccgggctaccccaatatgaat
caggggggcataatgggaactggacctccctatggacaggggattaatagtatggctggc
atgatcaaccctcagggacccccatatcccatgggtggaaccatggccaacaattcagca
gggatggcagccagcccagagatgatgggtcttggggatgtcaagttaactccagcctcc
aaaatgaacaacaaggcagatgggacacccaagacagaatcgaaatccaagaaatccagt
tcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgag
aggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgaca
aatctgcctgctgtgggtaggaagcctctggacctgtaccgcctctatgtgtctgtgaag
gaaattggtggattgactcaggtcaacaagaacaagaagtggcgggaacttgcgaccaac
ctcaatgtcggcacctcaagcagtgctgccagctccttgaaaaagcagtacatccagtgt
ctctatgcctttgagtgcaagatcgaacggggagaagaccctcccccagacatctttgca
gctgctgattccaagaagtcccagcccaagatccagcctccctcgcctgcaggatcaggg
tcgatgcaggggccacagacacctcagtcaaccagcagctccatggcagaaggaggagac
ctgaagccaccaactccagcatccacaccacacagccagatcccccccttgccaggcatg
agtaggagcaattcggtcgggatccaggatgcctttcctgatggaagtgaccccacattc
cagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctccgac
atgatggggcgcatgtcctacgagccaaataaggatccttacggcagcatgaggaaagct
ccggggagcgatcccttcatgtcctcaggtcagggccccaacggcgggatgggggacccc
tacagtcgagctgccggccctgggctgggaaatgtggcaatgggaccgcgacagcactat
ccctatggaggtccttatgacagagtgaggacggagcctggcttaggacccgagggaaac
atgggcactggggccccacagccgaatctcatgccttccaacccagactcggggatgtat
tctcccagccgttatccgccgcagcagcagcagcagcagcaacgacatgattcctatggc
aatcagttctccgctcaaggcaccccttccggcagccccttccccagccagcagaccaca
atgtatcagcagcagcagcagaattacaagcggccgatggatggcacctacggccctcct
gccaagcggcatgaaggggagatgtacagcgtgccgtacagcgcagggcaggggcagccc
cagcagcagcagctgccccccgcccagcccccgcctgccaaccagcagcaagctgctcag
cctccccctcagcaggacgtgtacaaccagtacggcaacgcctatcctgccactgccgcc
actgctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggc
cgggaccgtgtctcagcaccccctggctccaatacccagcagaacatgccaccacagatg
atgggcggccctatacaggcatcggctgaggttgcccagcaaggcaccatgtggcagggg
cgcaatgacatgacctacaactacgccaacaggcagagtacgggctcggccccgcaaggc
cccgcctatcatggtgtgaaccgaacagatgaaatgctgcacacggatcagagggccaac
catgaaggcccgtggccttcccatggcacacgccagcccccctatggtccttctgccccc
gtgccccctatgacaaggccccctccagccaactaccagcccccaccaagcatgcagaat
cacattcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctct
ccgagcaagtctccattcctgcactctggaatgaagatgcagaaggcagggcccccagta
cccgcctcgcacatagcacctgctcctgtgcagccccctatgattcggcgggacatcacc
ttcccacctggctctgttgaagccacgcagcctgtgttgaagcagaggcggcggctcaca
atgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctg
ctggcagagagcacgtgggcattagacaccattaacatcctgctgtacgatgacaacagc
atcatgactttcaacctcagtcagctcccagggctgctcgaactccttgtggaatatttc
cgacgttgcctgatagagatctttggcattttaaaggagtatgaggtgggtgacccagga
cagagaacactattggaccctgggagattcagcaaagcgtctagtccagcccctgtggag
ggggaggaggaggaagaccttctagatcccaaactagaggaggaagaagaggaggaagta
attgaaaatgatgaggagatggccttttcgggcaaggacaaagcagcctcagagaatagt
gaggagaaactgattagtaagtttgacaagcttccagtaaagatcgtgcagaagaatgac
ccatttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagcggcctg
ctgcactggcggattggtgggggcgacaccactgagcatatccagacccactttgagagt
aagacagagctgctgccttcccggcctcatgtgccctgcccaccagcccctcggaagtat
gtcacagcggtagagggcacaccagggacaacagagcaggagggccccccgcctgatggc
cccccagaaaaacgcatcacggccactatggatgacatgttgtccacgaggtctagcaca
ctgacggaggagggagctaagagtgtagaggccaccaaggaaagcagcaagtttccattc
ggcatcagcccagcgcagagccatcggaacatcaagatcctagaggatgaaccccacagt
aaagatgagaccccactgtgtacccttctggactggcaggattcccttgccaaacgctgc
atctgtgtctccaacaccatccgaagcttgtcgtttgtgccaggcaacgactttgagatg
tccaaacacccggggctgctgctgatcctgggcaagctgatccttctgcaccacaagcac
ccagaacggaagcaggcaccactaacttatgagaaggaggaggagcaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaaaacaccttg
gtcacgcttgccaacatctcggggcagttggacctctccccgtaccccgagagcatttgc
ctgcctgtcctggacggactcctgcactgggcagtctgcccttcagctgaagcccaggac
cccttctccaccctgggccccaacgccgtcctctccccccagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccccccttc
agccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccc
gtgtgccgggagatggctgtagtactgctggccaacctggcgcagggcgacagcctggca
gcccgtgccattgcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggac
agccttgctgccacgcagttccagcagagccaggccagcctgctgcacatgcagaacccg
ccctttgagccaactagtgtggacatgatgcgacgggctgcccgtgcgctgctggccctg
gccaaggtggacgagaaccactcggagttcacgctgtatgagtcacggctgttggacatc
tcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system
