Odocoileus virginianus (white-tailed deer): 110147821
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Entry
110147821 CDS
T10722
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr05014
Amyotrophic lateral sclerosis
ovr05017
Spinocerebellar ataxia
ovr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110147821 (ATXN2L)
05017 Spinocerebellar ataxia
110147821 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
110147821 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110147821 (ATXN2L)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110147821 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
110147821
NCBI-ProteinID:
XP_020765216
UniProt:
A0A6J0YVZ1
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All DBs
Position
33:complement(24936556..24948605)
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AA seq
1078 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSALPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGA
KSLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIP
VTSAVGDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKR
FQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLMASEPLGSPVSSK
AESVSDKEDKPPLPPAGGAEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTL
NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPL
VAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSS
TPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQA
GQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGF
TNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSAST
PSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRADGLQVGQDARVLGGE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggcctcccgggggcaccagcccgcccaacggcggtctcccgggg
cccctggcctccacctcggctctcccaggacctcctgcggccgcctccccctgcctaggg
cctgcagccgctgccgggagcgggctccgtcggggagcggagggcatcttggcgcctcaa
ccgccgccaccgcagcagcaacatcaggagagaccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcatttccttaccgctgttgtgggttccacttgtgatgtaaaggtg
aagaatggtaccacctatgaaggtatcttcaagacgctgagctcaaagtttgaactggca
gtggacgctgtgcaccggaaggtatcggagccagcaggtggccctcgtcgggaagacata
gtggataccatggtgtttaagccaagcgatgtcatgcttgtccacttccgaaatgttgac
ttcaattatgctactaaagataagttcactgactcagccattgccatgaactcgaaggtg
aatggggaacacaaggagaaggtgcttcagcgctgggaggggggcgacagcaacagtgat
gactacgacctggaatctgacatgtctaatggatgggaccccaacgaaatgttcaagttc
aacgaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtg
cccttagagaaggacaactcagaagaattccgtcagcgggagctgcgtgctgcccagttg
gcccgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaacgatgat
gggcgcacagaggaggagaagcacagtgcggttcagcgacagggctcagggcgcgagagc
cccagcttggcagccagggaggggaagtatatccctctaccccagcgagttcgggaaggt
ccccggggaggcgttcgctgcagtagttctcggggcggccggcctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgc
ggtatcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgcc
aagagtctgtcttcccccagcagcaggccttctggagaagcttctgttccacctcctcct
gcagtgggccggatgtacccgccacgctctcccaaatcagctgcccccgccccaatctca
gcttcctgtcctgagcctcccattggctcagcagtaccgacctcttcagcttccatccca
gtgacgtcagcagttggggatcctggagtgggctccgtttccccagcttctccaaagatc
tcactggcccccacagatgtaaaagaacttccggccaaggaacctggaaggacgctggag
tcccaggagttgtcccggattgcagggaaagtccctggccttcagaacgaacagaagcgt
tttcagctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcc
cctgagaccagcttggatccttttcctccacggatcctgaaagaggaggccaaagggaag
gagaaggaggtggatggtcttatggcttcagagcccctggggtctcctgtttcctcgaag
gccgaatcagtatcggacaaggaggacaaacctcccttgccaccagcagggggtgccgag
gggccggagcagcctcccccaccttgcccaagccaaactggcagccctccagtgggcctc
atcaagggagatgacaaggatgagggcccagttgccgaacaagtgaagaagtcgacgttg
aaccccaatgccaaggagttcaatcccactaagcccctgctttctgtgaataaatccacc
agtactccgacttctcctgggccccggactcattcaactccctccatcccggtgctgaca
gcaggccagagtgggctctatagcccccagtacatttcctacatacctcagatccacatg
ggaccagctgttcaggcacctcagatgtatccgtaccctgtgtccaactcagtgcctgga
cagcagggcaagtaccggggcgccaaaggctccctgccccctcagcgctcggaccaacac
cagccagcctccgcccctcccatgatgcaggccgccgctgccgccgctggtccacctctg
gtggctgccaccccttactcttcctacatcccctacaacccacagcagttcccaggccag
cccgccatgatgcagcccatggcccactacccctcgcagccggtgtttgcccccatgctt
cagagcaacccacgcatgctgacgtcggggagccatccccaggccatcgtgtcatcctcc
acccctcagtacccttctgcagagcagcccaccccccaggccctttatgccaccgttcac
cagtcctatccacaccatgccacgcagctccatgcccaccagccgcagccggccaccacg
cctactgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcg
gggcaggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggcc
ctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccctcagagcagc
ttcccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttc
accaacatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccc
cctcaccctggggctccccacccgccccaggtgatgctgctgcatccaccccagagccat
gggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccaca
ccctcaccctacccctacatcggacacccccaaggtgagcagcctggccaggcgcctgga
tttccaggaggagccgatgacaggattcgtgagttctcgttagctgggggtatttggcat
ggaagagctgatgggctgcaggtggggcaggatgcacgggttctgggcggggagtga
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