Odocoileus virginianus (white-tailed deer): 110147979
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Entry
110147979 CDS
T10722
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110147979 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovr03041
]
110147979 (PRPF8)
Spliceosome [BR:
ovr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110147979 (PRPF8)
Complex C
U5 SnRNP specific factors
110147979 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110147979
NCBI-ProteinID:
XP_020765473
UniProt:
A0A6J0YV27
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All DBs
Position
17:complement(21538893..21571442)
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AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggccctctagccccg
ctgccagactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcaattg
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgcacagaaggaagac
atgcctccagaacatgtcaggaagatcatccgagaccatggagacatgaccaacaggaag
tttcggcatgataaaagggtgtacttgggtgccctcaagtacatgccgcatgcagtcctc
aagctcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacattactggagccatttcctttgtcaatgagatcccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgggaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aatatcctcgatgttgagccactggaagccattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattaagggatagccggaagtatgta
aatggttccacttatcagcgctggcagttcacattgcctatgatgtctactctctaccgc
ctggccaatcagctcttgacagacttggttgatgacaattacttctatctgtttgatctg
aaggccttttttacatccaaggcacttaatatggccattcctggaggccccaaatttgag
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgacattaac
aagatcatcatccggcagcctatccgcaccgagtacaagattgcgtttccttacctgtac
aacaacctgccgcaccacgtgcacctcacctggtaccacactcctaatgttgtgttcatc
aaaaccgaggatcctgatttgccagctttctactttgaccctttgatcaacccaatttcc
cacagacactctgtcaagagccaggaaccattgccagatgatgatgaggagttcgagctc
ccagagtttgtggagccctttctgaaggacacacccctctatacagacaatacagccaat
ggcatcgccctgctctgggccccccggcccttcaacctacgttctggtcgcactcgccgg
gccctagacatcccccttgttaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtttcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggcccccgaaagcccaaaagaagaggtatctattccgatccttcaaagccaccaaa
ttcttccagtctaccaagctggattgggtggaggtggggctacaggtttgccgccagggc
tacaacatgcttaacctcctcattcaccgtaagaatctcaattatttgcacctggattac
aacttcaaccttaaacctgttaagacgctcaccaccaaggaaagaaagaaatctcgtttt
ggaaatgctttccatctgtgtcgagaagttctgcgtttaactaagctggtggtggacagt
catgtgcagtatcgattgggcaatgtggatgccttccagctggcagatgggttgcagtat
atcttcgcccacgtggggcagctgacaggcatgtaccgctacaaatacaagttgatgcgg
cagattcgtatgtgcaaggacctgaagcaccttatctattatcgcttcaacacgggtcct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggcaacctcctggcccggcagttt
gaaggccggcactcaaagggggtggccaagacggtaacaaagcagcgagtggagtcgcat
tttgaccttgaactccgggccgctgtgatgcatgatatcctggacatgatgcctgagggg
atcaagcagaacaaggcccggaccatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacattccttggaaggtccctgggctgccaacaccgatagagaatatgattctt
cggtatgtgaaggccaaggcagactggtggaccaacactgcccactacaaccgagaacgc
atccgccgcggggccactgtagacaaaactgtgtgcaaaaagaacctgggccgcctgact
cgtctctacctgaaggcagaacaggagcggcagcacaactacctaaaggacggtccttac
atcacagcagaggaagctgtggcagtgtataccactactgtgcattggctggaaagccgt
agattctcacccatccccttccccccgctctcctacaagcatgacaccaaattgctgatc
ttggctttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcccag
agggaggagctaggcctgatcgagcaggcctatgacaacccccatgaggcgctgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggac
ctctatagccacctggtgccagtgtatgacgtggagccactggagaagatcactgatgcc
tacctggaccagtacctgtggtacgaagctgacaagcgccgcctgttcccaccctggatc
aagcctgcagacacagaaccgccgcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagacaagcgagggtgagtgcaatgtcatgctggagtcacga
tttgagaagatgtatgagaagattgacttgaccttgctcaataggctgctgcgtcttatc
gtagaccacaatatagctgactacatgacagccaagaacaacgtcgttatcaattacaag
gacatgaaccatacaaattcatatgggatcatcagaggcctgcagtttgcctctttcatc
gtacagtactatggcctggtgatggacttgcttgtgttggggttgcaccgagccagtgag
atggccgggccacctcagatgccaaatgattttctcagtttccaagacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aataacgaaaacatcgttggatacaataacaagaagtgctggccccgagacgcccgcatg
cgcctcatgaagcatgacgtcaacctgggtcgggcagtgttctgggacatcaagaaccgc
ctgccgcgctcagtgacgacagtccagtgggagaacagcttcgtgtctgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgaaccagctatgaggagttcacccacaaggatggggtctggaacctacagaacgaggtt
actaaagagcggacggctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgcgtgcgtcaaattctgatggcctccggctccaccaccttcacgaagattgtg
aataagtggaacacagctcttattggccttatgacatactttcgagaggctgtggtaaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgaatcaag
attggcctcaactccaagatgccgagtcgattcccccctgtcgttttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcattccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacacttccgttcaggaatgagtcatgaa
gaagaccagctgattcccaatttgtatcgctacatacagccatgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgctcagaac
agacgactgaccctagaagatctggaagattcatgggatcgtggcattcctcgaatcaac
actctcttccagaaggacaggcacacactggcttatgataagggctggcgtgttcgaact
gactttaaacagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtactgacatgatccaggccctgggtggt
gtggaaggcattctggaacacaccctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtccatgaagtggaagaagctcaccaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaacgtgtacgtgggctttcaggtgcagctggacctgaccgggatc
ttcatgcatggcaagatccccacgctgaagatctctctcatccagatcttccgagctcac
ctgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtatttgatcaggaa
ctggatgcactggaaattgagacagttcagaaggagacaatccacccccgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctgtttgcatcctataagtggaatgtctcc
cggccctcattgctggctgattctaaggatgtgatggatagcaccaccactcagaagtat
tggattgacatacagttgcgctggggggactatgattcccatgacattgagcgttatgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcacccactggt
gtgctcattgccattgacctggcatataacctgcatagtgcctatggaaactggttccct
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaatcctgccttg
tatgtgctacgtgaacggatccgtaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaactacggtgagctcttctccaaccagattatttggtttgtg
gatgacactaatgtctacagagtgactatccataagacctttgaagggaatttgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaaacgtttggggcagttggctaaatggaag
acagctgaggaggtggctgccctgatccggtctctgcccgtggaggagcagcccaagcag
atcattgtcactaggaaaggcatgctggatccactggaggtgcacttgctggacttcccc
aatattgtgattaaaggatcagagctccagctccccttccaggcttgcctcaaggtggag
aagtttggggatctcatccttaaagccactgagccgcagatggttctctttaatctctat
gatgactggctcaagactatctcatcttacacggccttctcccgcctcatcctgattctg
cgcgccctgcacgtgaacaacgaccgcgcaaaggtgatcctgaagccagacaagactacg
atcacagagccgcaccacatctggcccactctgaccgacgaggagtggatcaaggtggag
gtgcagctcaaggacctcatcttggctgactacggcaagaagaacaatgtgaatgtggca
tcgctgacacagtcagaaattcgggacatcatcctggggatggagatctcagcaccatca
cagcagcggcagcagatcgctgagattgagaagcagaccaaggaacagtcgcagctgact
gcaacccagactcgcactgtcaacaagcatggtgacgaaatcatcacctccaccaccagc
aactacgagacccagactttctcctctaagactgaatggagggtcagggccatctctgcc
gccaacctgcacctaaggaccaatcacatctatgtttcatctgatgacatcaaggagact
gggtacacctatatccttcccaagaacgtgcttaagaagtttatctgcatatctgacctt
cgggcccagattgcaggatacctgtatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtgccacagtggggcactcaccagactgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaaccgttaggttggatccacact
cagcccaacgagtctccccagctgtcaccccaggatgtcaccacccatgccaagatcatg
gccgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
gggtcctgcaccctgacagcctacaagctgactcccagtggctatgaatggggccgccag
aacacagataagggcaacaaccccaagggctacctaccctcgcactacgagagggtccag
atgctactgtcggatcgcttccttggcttctttatggtccctgcccagtcctcgtggaac
tacaacttcatgggtgtccggcatgatcccaacatgaagtacgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcaccggccctcccacttccttaacttcgctctcctg
caggagggcgaggtctactctgcggaccgagaggacctctatgcgtag
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integrated database retrieval system
