Odocoileus virginianus (white-tailed deer): 110148207
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Entry
110148207 CDS
T10722
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr05202
Transcriptional misregulation in cancer
ovr05206
MicroRNAs in cancer
ovr05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110148207 (ZEB1)
05206 MicroRNAs in cancer
110148207 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
110148207 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110148207 (ZEB1)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
110148207 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
110148207
NCBI-ProteinID:
XP_070328239
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All DBs
Position
9:complement(30971525..31161689)
Genome browser
AA seq
1126 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGVPDD
DLPSDQTVLPGSSAREGSAKSCWEDDAGKEGQEILGPEARADEVGCAVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEDDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCSSPSLSASPGSPTRPQMRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSAPLQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKETPVPTNNCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DINALPELKHYDLKQPAQPPPPPTPEAAKPEASVPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKANTPAKSD
DQPQAADADEAQDSTGNRQSPLKRASSPVLPGGSAVNGSRSSASSPSPLNLSSSRSAQGY
SYPTEGAQEEPQVEPLDLSLPKQQGELLERPTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIP
QVAYTYSTAVSPAVQETPLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREPPESGAAGPGVPPEQHAGQGDSDER
ESSTREEDEDSDKEEEEEEEERELEELEEKGSGAARGPEEVEDGEEDGEEEMDDEEDEDE
EVEDEGERAETEGVGQGAGAGSQAHSLEHKVSEGSEQVSEEKTNEA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaactcagattcagatgatgaagacaaactccat
attgtggaagaagaaagcatcacagatgcagccgactgtgaaggcggcgtgccagacgat
gacctgccctcagaccagacagtgttgcccgggagtagcgcgagagaagggagtgcaaag
agctgctgggaggacgatgcaggaaaggaaggacaagaaatcctggggccagaagctcgg
gcagatgaagtgggatgtgcagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcctaacgttgaagagttcctgcaacaacaagatactgcagtcatctac
cccgaggcacccgaggacgaccagaggcagggcacgccggaggccagcgggcatgacgaa
aacggaacaccagatgcattttcccagttgctcacctgtccgtattgtgacagaggatat
aaacgctttacctctctgaaagaacacattaagtatcgccacgagaagaatgaagacaac
ttcagctgctccctgtgcagctacacgtttgcatacagaacccagctcgagcgccacatg
acctcccacaaatcaggacgagagcagagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tctggttcctacagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcggccaagaacagggctcaagacctcgcagtgttcctcaccctccctctcagcctct
ccgggcagtcccacgcgaccacagatgcggcagaagatagagaacaagccccttcaagag
caacttcccgtaaaccagattaaaactgaacctgtggattatgagttcaaacccatagtg
gttgcttcaggaatcaactgttcagcccctctacagaacggggttttcagtggtggtggc
cccttacaggcaaccagttctcctcagggtgtggtgcaggccgttgttctgccaacggtg
ggtttggtgtcccccatcagcatcaatttaagtgatattcagaatgtacttaaagtggcg
gtagatggtaacgtcatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcaatgcttcatccatccagcaaggcggccattctgttatttcagcc
atcagtcttcctctggttgatcaagatggaacaaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttgaaaaaagaaaccccagtccct
accaacaattgcaaaagtgaaaagttaccagaagatcttactgttaagtctgaaaaggac
aaaagctttgaagggggagggaatgacagcacttgcctcctgtgtgacgactgtcccggg
gacatcaatgcacttccggagctaaagcactatgacctgaagcagcccgcccagccccct
ccgccccccaccccagaagctgccaagcccgaggcctccgttccatcggggtccggagat
ggcagtttgtctcccagtcagccacctttaaagaacctcttgtctcttctgaaagcatat
tatgctttgaacgcacagccaagtgcagaagagctctcaaaaattgctgattccgtgaac
ctaccactggatgtagtgaaaaagtggtttgaaaagatgcaagcaggacagatctcagtg
cagtcttctgaaccatcttccccggaaccaggcaaagccaacacccctgccaagagcgat
gatcagcctcaggctgcagatgcagatgaagcccaggacagcacagggaaccgccagagc
cctctgaagagagctagctctcccgtcttaccagggggctcggccgtcaatggttccaga
agcagcgcctcctccccttccccactgaacctctcttcctccagaagcgcacagggttac
tcgtacccgacagaaggggcgcaggaagagccgcaggtcgaacctcttgatctctcacta
ccaaagcagcagggcgagttattggaaaggccaactatcactagtgtttaccagaacagt
gtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctaccgtcactgcccagttacccacgatcgtggccatcactgac
cagaacagcgttccgtgcttgcgagcactggctgccaacaagcagaccatcctgatcccc
caggtcgcctacacatactcaaccgcagtcagcccagcggtccaggaaacacccttgaag
gtgatccagcccaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatcc
aacgtagaggatcagaacgactccgattccacgccccccaaaaagaaaatgcggaagaca
gaaaacggaatgtatgcttgtgatttgtgtgataagatatttcaaaagagtagctcactg
ttgagacataaatacgaacacacaggtaaaaggccccacgagtgtggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacatgcgcctgcactccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctactcccaacacatg
aaccaccgctactcctactgcaagagggaggccgaggagcgggagccccccgagtcgggg
gctgcgggcccaggggtcccacccgagcagcacgcggggcagggcgactcggacgagagg
gagagctcgacgcgggaggaggatgaggacagcgacaaggaggaggaggaggaggaggag
gagcgggagctggaggagctggaggagaagggaagtggagcggcgcgagggccggaggag
gtggaggacggagaggaggacggcgaggaggagatggacgacgaggaggacgaggacgag
gaggtggaggatgaaggggagagagcagaaacggaaggtgtggggcagggggcgggggct
ggaagccaggcccacagcttagaacacaaagtaagtgagggcagcgagcaggtgtccgaa
gagaaaacaaatgaagcctaa
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