Odocoileus virginianus (white-tailed deer): 110148289
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Entry
110148289 CDS
T10722
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110148289 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110148289 (VPS35)
Membrane trafficking [BR:
ovr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110148289 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
110148289
NCBI-ProteinID:
XP_070307466
UniProt:
A0ABM4GVW5
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All DBs
Position
20:44982648..45010754
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEEPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccgcaggatgagcaggagaaactcttggatgaagccata
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactgcggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactacttggaagtttac
ctgacagatgaatttgctaaaggaagaaaagtggcagatctctatgaacttgtacagtat
gccggaaacattatcccaaggctttatctgttgatcacagttggagttgtatacgtcaag
tcatttcctcagtccaggaaagatattctgaaagatttggtagaaatgtgccgtggtgtg
caacatcccttaagaggtctgtttcttcgaaattatctacttcagtgtaccagaaacatc
ttacctgatgaaggggagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtcctactcaactttgcagaaatgaacaagctctgggttcgaatgcagcatcag
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgactggcatattggagcaagtggtgaattgcagagatgctttggctcaggaa
tatctcatggagtgcattattcaggttttccctgatgaattccaccttcaaactttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctgggatcccaaca
gatattaaactttttgatatattttcacagcaggtggctacagtaatacagtctagacag
gacatgccttcggaggatgttgtatctttacaagtctctctcattaatctcgccatgaag
tgttatcctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattt
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagattcctgttgatacttacaacaatattttaacagtcttgaaattaaaacat
ttccacccactctttgagtattttgactatgagtccagaaagagcatgagttgttacgtg
cttagtaatgttctggattataatacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatctacactgattcaggatcagccagatcaacctgtagaagaacctgac
cccgaggactttgctgatgagcagagccttgtgggcagattcattcatcttctgcggtct
gaggaccctgatcagcagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtatttgcagcttaccagctggct
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcgtttgctcaccagactatcagtgctttgatcaaagcagagttggcagaattaccc
ttaagactttttcttcagggggctctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcgttttctctgtacgaagatgaaatcagtgat
tccaaagcacagctggctgccatcaccttgatcattggtacttttgagaggatgaggtgc
ttcagtgaagaaaaccatgaacccttgaggactcagtgtgctcttgctgcatccaaactt
ctgaagaaacctgatcagggccgagctgtgagcacctgtgcccatctcttctggtctggc
agaaacacagacaaaaatggagaggagctgcatggaggcaaaagggtaatggaatgccta
aagaaagctctgaaaatagcaaatcagtgcatggacccctctctacaagtgcaacttttt
atagaaatcctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcactatt
caggttttgaatcagcttatccaaaagattcgagaagacctcccaaatcttgaatccagt
gaggaaacagagcagattaacaaacatttccataacacactggagcatctgcgcttgcgg
cgggaatcaccagaatctgaagggccaatttatgagggtctcatcctttaa
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