Odocoileus virginianus (white-tailed deer): 110148344
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Entry
110148344 CDS
T10722
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110148344 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovr01009
]
110148344 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110148344 (PCDH20)
Protein phosphatases and associated proteins [BR:
ovr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110148344 (PCDH20)
Cell adhesion molecules [BR:
ovr04515
]
Cadherins
Protocadherins
110148344 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
110148344
NCBI-ProteinID:
XP_020765945
UniProt:
A0A6J0YVV8
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All DBs
Position
8:568360..575406
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AA seq
951 aa
AA seq
DB search
MRGGRDACASRARAVSWSRATWRPSPDMGSLSCPSSSASLGNLPHLLLFFLFVGPFNCLA
SYSRATEILYSLNEGLPAGVLIGSLAEDLRLLPSAGEQDLQSQSPQHRVAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGTAWRSSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPRFPISQISVWVPENAPVNTRLAIEHPAVDPDMG
TNGVQTYRLLDYHRMFTLDVEENESGERTPYLIVMGQLDRETQDQYVSVIIAEDGGSPPL
LGSATLTIGITDINDNCPLFTDSQINITVYGNATVGTAIAAVRAVDTDLGNNAQITYCYS
QKVPQASKDLFHLNENTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITVLVTIIKVI
FRPPEIIPRYIANEIDGIIYLKELEPVNTPIAFFTIRDPEGKYKMNCYLDGEGPFRLLPY
KPYSNEYLLETTKPMDYELQQFYEIAIVAWNSEGFQVKKMIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLAKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPQESVATVVITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADTGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGVP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSLVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIENLLRKEPEISIEEKEPQISIEPTHRKAESVSCMPTLVALSVISLSS
IMFLTGMGIYICLRREKKHHREDDNLEVQTPLKGKIDLHMRERKPMAISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcagggatgcgtgcgcctcgcgggcccgggcagtgagctggagtcgggcg
acctggcgcccgagcccggatatggggagtctcagttgtcctagcagcagcgccagcctc
ggaaacctgccgcatctgcttctgtttttcctcttcgtgggacctttcaactgcctggcg
agttacagccgggccacggagattctgtacagcctgaacgaggggctgccggcgggggtg
ctcatcggcagcctggcggaggacctgcggctgctgcccagcgcaggggagcaggacctg
cagtctcagtcgcctcagcaccgcgtcgccgagcggaaccctcctctctccttcagcctg
gcctcccaggggctgagtggacagtacgtgaccctagacaaccgctcaggagagctgcac
acttctgcccaggagatcgaccgggaagccttgtgtcttgaaggaggcggagggactgcc
tggaggagcagcatttccatctcctcttcgccttctgctgactcttgtcttttgcttctg
gatgtcctagtcctgcctcaggaatactttaggtttgtgaaggtaaaaatcgctatccgg
gacatcaatgacaatgccccgcggttccctatttctcaaatatcagtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccgtggacccagatatgggc
actaatggtgttcagacctaccgcttgctggactaccatcgcatgttcaccctggacgtg
gaggagaatgagagcggggagcgcaccccctacctaatcgtcatgggacagctggacaga
gagacccaggaccagtatgtgagcgtcatcatagctgaggatggtgggtctccaccactg
ctaggcagtgccaccctcaccattggcataactgacattaatgacaactgcccactcttc
acagactcacaaatcaacatcactgtgtatgggaatgctactgtgggcacagcaattgca
gctgttcgggctgtggacacagacttgggaaacaatgctcagatcacctactgttacagt
cagaaagttccacaagcatccaaggatttattccatttgaatgaaaacaccggggtcatt
aaacttttcagtaagattggaggaagtgttctgcaaacacacaagctcaccatccttgct
aatgggccaggctgcatccctgctgtgatcactgtcctggtgactattatcaaagtcatt
ttcaggccacctgaaatcatccctcgttatatagcaaatgagatagatggtattatttat
ctgaaagaattggaacctgttaacactccaattgcattctttaccataagagatccagaa
ggtaaatacaagatgaactgctatctggatggtgaaggaccatttaggttattgccctac
aaaccatacagtaatgagtatcttctagaaacgacaaaacctatggattatgagctacag
caattctatgaaatagccatagtagcttggaactctgagggatttcaagtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctgttttccttcaacccttggta
gaactaaccattgaagaaaataatgcacccaatgcctttttggctaagctagatgctaca
gatgctgacagtggagagaggggccaagtttcatattttctgggacctgatgctccatca
tatttttccttggacagtgtcacaggaattctgacagtttctactcagttggatcgagag
gagaaagaaaagtatagatacacagtcagagctgttgactctgggaagccaccccaagaa
tcagtagccactgtggttattacagtgttggataaaaatgacaacagccctaggttcatc
aacaaggacttcagcttctttgtgccagaaaactttccaggatacggtgaaattggagta
attagtgtcacagacgctgatactgggcaaaacggatgggtcgctctctccgtggtgaac
cagagtgatatttttgtcatagacactggaaagggcatgctgagagctaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagccgtcgatgggggtgtgcct
cccctctcctctactgcaaaaatcacaattctccttctagacattaatgacaacccgcct
ctcgttttatttcctcagtctaacatgtcttacttattggtgttgccttctactctccct
ggctcactagttacagaggtctatgcagttgacaaagatacaggcatgaatgctgtcata
gcctatagcatcatagggagaagagggcctaggcctgaatcctttagaattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatgggctccatcgttta
ctggtgaaagtgagtgatcatggttatccagaacctctccattccacagtcatggtgaat
ctatttgtcaatgacactgtcagtaatgaaagctacattgagaatcttttaagaaaggaa
ccagaaattagcatagaggagaaagaaccacagatttcaatagaaccaactcataggaaa
gctgaatctgtgtcttgtatgcccaccttagtagctctatctgtaataagcttgagttct
atcatgttcttaacagggatgggcatatatatctgtttaaggagagagaagaaacaccat
agggaggatgacaatttggaagtacagactccattaaaaggaaaaattgacttgcatatg
agagagaggaaaccaatggctatttctaatatttga
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