Odocoileus virginianus (white-tailed deer): 110149010
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Entry
110149010 CDS
T10722
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110149010 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110149010 (FIP1L1)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110149010 (FIP1L1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110149010
NCBI-ProteinID:
XP_020766978
UniProt:
A0A6J0YYT3
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Position
29:2095996..2161602
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AA seq
568 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHTDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNAEKETALPSTKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANEN
SNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPI
TVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVD
TSKQWDYYSRREKDRDRDRERDRERDRDRERERERTRERERERDHSPTPSVFNSDEERYR
YREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHK
KSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacactgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcct
ccatctggaattgaagacgaaactcctgaaaatggcgtacctaaaccgaaagtgactgag
actgaagatgatagtgacagcgacagtgatgatgatgaggacgatgttcacgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaaaacaggaggaagagtttatggaactactgtaggaacgaaagtcaaaggagta
gatcttgatgcacctggaagcattaatggagttccactcttggaggtagacttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattacggg
tttaatgaagatacctggaaggcttactgtgaaaaacagaagaggatacgaatggggctt
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggg
agaactggaaacgcagagaaggaaacagcgcttccatctacaaaagcggagttcacttct
cctccttctttgttcaagactggactcccaccaagcaggagattacctggggcaattgat
gttattggtcagactataactatcagccgagtagaaggaaggcgacgagcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgctactgaagtagacaacaattttagcaaa
ccacctccatttttccctccaggagctcctccaactcaccttccacctcctccatttctt
ccacctcctccaactgtcagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccgccaggtgctccgcctccttctctcatacca
acaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcctggttctgctccttcatggcctagtcttgtggac
accagcaagcagtgggactattactcaagaagagagaaagaccgagacagggatcgagag
cgggaccgggagcgggaccgggaccgagagagagagcgggagcgcacgcgggagcgggaa
cgggagcgcgaccacagccccacgcccagcgtctttaacagcgatgaagagcgctacaga
tacagggagtatgcagaaaggggctatgagcgccacagggcgagccgggagaaagaagag
cggcacagagagaggcggcacagggagaaggaggagaccagacacaagtcctcccgcagc
aacagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaa
aaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaacaggag
agcaccgaagctacacctgcagaatag
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