Odocoileus virginianus (white-tailed deer): 110149562
Help
Entry
110149562 CDS
T10722
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110149562 (TAF1B)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110149562 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
CoV_NSP2_N
DUF4661
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
110149562
NCBI-ProteinID:
XP_020767692
UniProt:
A0A6J0Z2N0
LinkDB
All DBs
Position
2:complement(83357465..83410895)
Genome browser
AA seq
590 aa
AA seq
DB search
MDLEEAREFRERCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVIDTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAEALQSLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSRRKSTVLEDNSSHSDWESEPELLSDVSRLSFGESGSESQPDVRTPKPFPIIK
ASHSETTSVCSGSLDGVEYSLRKEKGVMKMSVPRTLAFCYLSLLWQRETITLSDLLRFVE
EEHIPYIHAFQHFPEEMKLYGRDKGIFAIECWPNYEVIFKKIIEVATFLDLPRFPDITEN
CYLHPNILCMKYLMEVNLPDEMHNLTCLVVKATGIGEVDFLRFDPIAKKAKTVKYDVQAV
AVIVVALKLLFLLDDNLEWSLSNIAEKYNKKNKEDKPWFDFRKWYQVMKKAIDEKKQKWE
EARAKFLWKGEKPLYYSAIDRPVVYKRREMVVSLQKQFSTLVDSAPNIEKKKPSSFQFNW
TEEDSERPCFHSHSLQGVLQQKGQSLRTKNSLYWLSTQKFCKSHCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSFLHEEVSLIEKRLFKAKYNKTNKKSSRSRKARKY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatctggaggaggcgagagagttcagagagcgctgttctcagtgtgctgctgtttct
tggggtcttactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttatagacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttatcaacaagcagaagccttacagagccttggagtaggcccagagtta
aagaatgaagttttgcataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttataccagcagaaggaaaagtacggtattagaagataattcgagc
cattcagactgggagagtgagcctgagctactgagtgacgtgagccgactgtcttttgga
gaaagtggatcagagtctcagcctgatgtccgcactccaaagcctttccccatcatcaaa
gcatcacactcagaaacgacctctgtctgttccgggtctcttgatggagtggaatattcg
ctgcggaaggagaagggggtcatgaagatgagcgtaccacggacgctagccttctgctat
ctgtcattactttggcagagagagacaattactctttcagatcttttgagatttgttgaa
gaggaacatattccttacatacatgcttttcagcattttccagaagagatgaaattatat
ggacgtgacaaaggaatctttgccatagagtgttggcctaactatgaagttatctttaaa
aaaataattgaagttgccacatttttagatttgccgcgttttccagacataactgaaaac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaggtcaatctccctgat
gaaatgcataatttaacctgcctagtggtaaaagcgactggaataggagaagtggatttt
ctaagatttgatcctatagctaaaaaggcaaaaactgttaaatatgatgtgcaagctgta
gctgtcattgtagtggcattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatattgcagagaaatataataaaaagaacaaagaagataaaccatggtttgat
ttcagaaaatggtaccaagttatgaagaaagctattgatgagaaaaaacaaaagtgggag
gaagccagggcaaagtttctgtggaaaggtgaaaagccactctactactcagccattgac
aggccagtggtgtataaaagaagagaaatggtggtgagtctacagaaacagtttagcaca
ctggtggattcagcaccaaacattgaaaaaaaaaagccttcaagttttcagttcaactgg
actgaagaggacagcgagaggccttgtttccatagtcatagcctccagggagtcctgcag
cagaaaggccagtccctgagaaccaagaattccctctactggctgagtactcagaagttc
tgtaaaagccattgtaagcatgtgacaacctatgaagaatccaatttttctctgagttac
cagtttatactaaatctcttctccttcttgctgagaataaagacttcctttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatataataaaacaaacaagaaa
tcttcaagatccaggaaagcaagaaaatactga
DBGET
integrated database retrieval system
