Odocoileus virginianus (white-tailed deer): 110150173
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Entry
110150173 CDS
T10722
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X2
KO
K03063
26S proteasome regulatory subunit T3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03050
Proteasome
ovr05010
Alzheimer disease
ovr05012
Parkinson disease
ovr05014
Amyotrophic lateral sclerosis
ovr05016
Huntington disease
ovr05017
Spinocerebellar ataxia
ovr05020
Prion disease
ovr05022
Pathways of neurodegeneration - multiple diseases
ovr05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110150173 (PSMC4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110150173 (PSMC4)
09164 Neurodegenerative disease
05010 Alzheimer disease
110150173 (PSMC4)
05012 Parkinson disease
110150173 (PSMC4)
05014 Amyotrophic lateral sclerosis
110150173 (PSMC4)
05016 Huntington disease
110150173 (PSMC4)
05017 Spinocerebellar ataxia
110150173 (PSMC4)
05020 Prion disease
110150173 (PSMC4)
05022 Pathways of neurodegeneration - multiple diseases
110150173 (PSMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ovr03051
]
110150173 (PSMC4)
Proteasome [BR:
ovr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110150173 (PSMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
110150173
NCBI-ProteinID:
XP_020768714
UniProt:
A0A6J0Z4Y9
LinkDB
All DBs
Position
20:complement(12109312..12136826)
Genome browser
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataggcatcctggtggagaaagctcaggacgagatcccagccctgtctgtg
tcacggccccagactggcctgtccttcctggggcctgagccagaggacctggaggacctc
tacagccgctacaagaagctacagcaggagctggagttcctggaggtgcaggaggagtat
atcaaggatgagcaaaagaacctgaagaaggaattcctccatgcccaggaggaggtgaaa
cgaatccagagcatcccattggttatcgggcagtttctggaggctgtggatcagaataca
gccatcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgac
cgggagctgctcaagcccaacgcctcggtggccctccacaagcacagcaacgccctggtg
gacgtgctgcctcccgaggccgacagcagcatcatgatgctcacctcagatcagaagcca
gacgtgatgtatgcggacatcgggggcatggacatccagaagcaggaggtgcgggaggcc
gtggagctcccactcacacacttcgagctctacaagcagatcggcatcgacccaccccga
ggcgtcctcatgtacggcccacctggctgcgggaagaccatgctggccaaggctgtggct
catcacacgacagctgcattcatccgcgtcgtgggctcagagttcgtacagaaatacctg
ggcgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaacgcacctgcc
atcatcttcatagatgagattgatgccattgccaccaagagattcgatgcccagacaggg
gctgacagggaggttcagagaatcctgctggagctactgaatcaaatggatggattcgat
cagaacgtcaacgtcaaggtgatcatggccacaaacagagcagacaccctggatcctgcc
ctgctgcggccgggacgccttgaccgaaaaattgaatttccactccctgaccgccggcag
aagagactgattttctctactatcaccagcaagatgaatctctctgaggaggttgacttg
gaagattatgtggccagaccggataagatttcaggagctgatatcaactccatctgtcag
gagagcgggatgttggctgtccgagagaatcgctacattgttttggccaaggacttcgag
aaagcatacaagacagtcatcaagaaggacgaacaggagcatgaattttacaaatga
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