Odocoileus virginianus (white-tailed deer): 110151147
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Entry
110151147 CDS
T10722
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110151147 (CHD1)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110151147 (CHD1)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110151147 (CHD1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110151147 (CHD1)
SLIK complex
110151147 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
110151147
NCBI-ProteinID:
XP_070321955
UniProt:
A0ABM4I2C0
LinkDB
All DBs
Position
3:complement(92048271..92123060)
Genome browser
AA seq
1799 aa
AA seq
DB search
MNGHSDEESVKNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQHQASSNSGS
EEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKSKNGKKIVGQKKRQIDSSEEEEDDEEEYDNDKRSSRRQATVNVS
YKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADG
DPNAGFEKNKEPGETQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPT
FRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKE
AQRLSGAGGSKRRKARGKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPN
KKVKTERDSEEKTEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKR
ENKVKEAIQKEKDIKEEKLSESKSESKERSKKSSVSDAPVHITASGEPVPIAEESEELDQ
KTFSICKERMRPVKAALKQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNTQVTRNPDVERLK
ENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDLYKKSDSRKRPYSSFSNGKDHRDWDHY
KQDSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYTH
HKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttaaaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagcgactcagactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttctggaaatcgagccctagtattttggctgttcagagatctgca
atgcttaagaagcagcagcagcagcagcagcagcatcaagcttcatctaatagtggatca
gaggaggattcctctagcagtgaagattccgatgactcatccagtgaggtcaaaaggaaa
aagcataaagatgaagattggcagatgtctggatcgggatctccctctcagtctggttcg
gattcagaatctgaagaagagcgagataaaagcagttgtgatgaaacagaatctgattat
gagccaaaaaataaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatgga
aaaaagattgttggacaaaaaaagagacagattgattcatctgaggaggaggaggatgat
gaagaagaatatgataatgataaaagaagctcccgtcgccaagcaactgtcaatgttagc
tataaagaagatgaagaaatgaaaacagattctgatgacctcctggaagtctgtggagag
gatgttcctcaacctgaggaagaggaatttgaaacaatagaacggtttatggattgtcgg
attggaagaaaaggagctactggtgctactacaaccatctatgcagttgaagcggatggt
gacccgaatgcaggatttgaaaagaataaggaaccaggagagacccagtatttaattaaa
tggaaagggtggtcacatatccacaatacttgggagacagaggaaacccttaagcagcaa
aatgttagaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaaga
tggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttaca
gatgatctccataagcagtatcaaatagtggagcgaataattgctcattccaatcagaag
tcagctgctggctatcctgattattattgcaaatggcagggccttccatactcagagtgc
agctgggaagatggcgctcttatttccaaaaagtttcaagcatgcatagatgagtatttc
agcaggaatcaatcaaaaaccactccttttaaagactgcaaagtattaaaacaaaggcca
aggtttgtagccctgaagaagcagccatcctatattggaggacatgaaggattagaatta
agagattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggtaatagt
tgcatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaac
tatttgtttcatgaacaccaattatatggaccttttctgttggtcgtaccactctccact
ctcacttcctggcaaagggagattcagacatgggcttctcaaatgaatgctgtggtttat
ctaggtgacatcaacagcagaaacatgatacgaactcatgaatggatgcatccccagacc
aaacggttaaaatttaatatactgttaacaacttatgaaattttgttgaaggataaggca
ttccttggaggtctgaattgggcatttataggtgtggatgaagcgcatcgattaaagaat
gatgactctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatc
actggaactcctctgcaaaactccctcaaagaactctggtctttgctacatttcattatg
ccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatat
ggttatgcaagcctccacaaggagcttgagccttttctgttgcgcagggttaagaaagat
gtggaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgcttta
cagaaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttcc
aagggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccat
tgctacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaa
cacttaatccgtagcagcggaaaactaattcttcttgacaaactgttaattcgcctaaga
gagcgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgca
gaatatttgaagtatcgtcagttcccctttcaaagattagatggatcaatcaaaggggag
ctgaggaaacaagctctggatcattttaatgctgaaggatcagaggatttctgctttttg
ctttccacaagagctggaggtttaggaattaacttagcctcagctgacactgttgtcata
tttgattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaatt
gggcaaaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggat
attcttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggac
acaactgggaagacagtactacacacaggttctgccccttcaagttctactcctttcaat
aaagaagagttatcagccattttaaagtttggtgctgaggaactttttaaggagcctgaa
ggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaact
catgaaaatgaagcaggacctttaactgtaggagatgaattactttctcagttcaaggtt
gccaacttttcaaatatggatgaggatgatattgagctggagcctgaaagaaattcaaag
aactgggaagaaatcattcctgaagagcaaagaagacgattagaagaagaagaaagacaa
aaggaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagc
ttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgat
tcaatttcagaaagaaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaa
aatattaaaggatttagtgatgcagaaattcggcggtttatcaagagctacaagaaattt
ggtggccctctggaaagattagatgctattgctcgagatgctgaattagtcgataagtca
gagacagacctcagacgactaggagaattggtacataatggttgcattaaagctttaaag
gacaactcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggcccaaca
ttccgaatatcaggtgtacaggtgaatgccaagctggtcatctcccatgaagaagaatta
ataccactgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatccca
tgccacacgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttg
ttaattggtatctatgaatatggatatggaagctgggaaatgattaaaatggatcctgac
ctcagtctgacacacaagattcttccagatgatcctgataaaaagccacaagcaaaacaa
ttacagacacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaa
gctcagaggctttctggtgcaggaggttcaaaaaggcgaaaagcaagaggtaagaagaat
aaagcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcccttgcct
tcagaaaagtctgatgaagatgatgataaggatgaaatcacttctgtgaaacatccaaac
aaaaaagttaaaacagaaagagacagtgaagaaaaaactgagccagatgtttgtataaag
aaggaaccagaagaaaagagggaagcaaaagaaaaggaaaataaaagagaacttaaaagg
gagataaaagaaaaagaggataagaaagatataaaggaaaaggattttaaagagaaaaga
gaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaagaagaaaagttgagt
gaatccaagtctgaaagcaaggaaagatctaagaaatcctcagtgtcggatgctccagtc
cacatcaccgcaagtggggaaccagtgcccatagcggaagaatctgaagagctggatcag
aagacattcagcatttgtaaagagaggatgaggccggtcaaagcagcactgaagcagctt
gataggcctgagagaggcctttcggaaagagaacagctggaacatactagacagtgcttg
ataaaaatcggagaccatattacggaatgtctgaaagagtatacaaatcctgaacaaatc
aagcagtggagaaaaaacctgtggatttttgtatctaagtttactgagtttgatgcaaga
aaattacataaattatataagcatgctattaaaaaacggcaggaatctcagcaaaataat
gaccagaacagcagcttgaatactcaagtgactagaaatccagatgtggaaagattaaaa
gagaatacaaatcatgatgacagcagcagggacagttattcatctgacagacacttatct
caatatcatgatcatcataaagaccgacatcagggagatttgtacaagaagagtgactct
agaaagagaccttattcttcttttagtaatggtaaagatcatcgtgattgggatcactac
aagcaagacagcagatattatagtgatagagagaaacacagaaaactggatgatcacagg
agtagagaccacagatcaaatttggaaggaagtttaaaagacagaactcattctgatcat
cgttctcattcggatcatcggttacattcagaccatcgatcaagttctgaatatacacac
cataaatcttccagggattataggtatcactcagattggcagatggaccatagagcttcc
agtagtggccccagatctccactagaccagaggtctccttatggctccagatctcctttt
gaacactcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
