Odocoileus virginianus (white-tailed deer): 110151227
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Entry
110151227 CDS
T10722
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110151227 (AFF3)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110151227 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
110151227
NCBI-ProteinID:
XP_070331005
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All DBs
Position
2:complement(4693150..5271844)
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AA seq
1374 aa
AA seq
DB search
MRQPRTSCASPTLRAAARPSARLAGSRRAPPGGRGRGAERARAARSSAAAATAAAALTPP
TMDSFDLALLQEWDLESLWGEDILNQRNDSLVVEFQSSASRCRSVYEPDRNVLRRKERER
RNQETQQDDGTFNSSYSLFSEPYKTNKGDELSNRLQNTLGNYDEMKDFLTDRSNQSHLVG
VPKPGVPQAPVTKIDEHFVADSRTQTQPASICSTTSAPAAVPGQQSKRGTVGWQKAGHPP
SDGQQRASKHGHRTLDLNRSAHPENRNKNPSPSVSSPSSSSSSSSSSNSAQQGALRNLLG
DGVGRQQPRTKQVCNVEVGLQTQDRPPAMGAKHGGSGHCVQNFPPSLASKPSLVQQKPTA
YVRPMDGQDQAPDESPKLKSSTETGVHCLYRGVPAAKSESARAKAKLSKFSIPKQGEESR
SGETNSCVEEIIREMTWPPPLAAIQPPGKVEPSKFPFPNKDSQLASSGHNNPKKGDAEPE
SPDNGTSNTSSLGWLSPFTDKGNDALRGMLEDDLKLSSDEEENEQQAAQRTALHALSDSA
GLQPADCRASAPSSKGSSGGSSSSGSSSSSDSETSSGSDSETESSSSESEGSKPAHCSSP
EAEPASSNKWQLDKWLNKVNHHKPPVLIQNESHHGPESSQYYTPVKEDTQDCGKLPDVCP
PGLRDKDIKGACKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVTAAAAPPPAVPGAPAES
APAPARRSAGKKPARRTERTSACDSGPRPEEPVAAEALGASAGLPPEPPKPRPCGNSRTN
HRKELRSAVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQEDYPLSKAVAA
AAAAAAASASGNDPRLKEAPSSISGGGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRN
ELLSPLKDSDEVRSLWVKIDLTLLSRIPEHLPQEPGVLSAPAAKDSESAPPSHASEAPVE
KTLPKSKRKRKCDNEDDYREIKKAPGERESSSRLTASANSTLPANHCSMNINSLAIPINK
NEKMLRSPISPLSDASKHKFSGEDLTSSSRSNSNGLLTSTSSNKKHKVESQLQTHAADLM
KAAHNNSESILHKSRPQTEPWSPGTNGHRDCKRQKLIFDDMPRSADYFMQEAKRMKHKAD
AMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSSPN
ATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGASGK
STGTPSPMSPNPSPTGSVGSQGSLSNANALSPSTIVSIPQRIHQMAANHVSITNSILHSY
DYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSAHLA
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagccccggacgagctgtgcatctccgaccctccgcgccgccgcccgcccctcg
gcccggctggccggatcgcgccgggcgcccccgggaggccggggtcgcggcgcggagcgc
gcgcgggcggcccgatcctcggcggcggcggcgacggcggcggcggcgctgacacctccc
accatggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggt
gaagacatcctaaaccagaggaatgactctctagttgtggagtttcagtcgtcagccagc
agatgcaggagtgtctacgaaccagatagaaacgtgttacggagaaaagaacgagagaga
agaaatcaggaaactcagcaggacgatggcacatttaattcgagttactccctctttagt
gaaccctacaagactaacaagggggatgagctctccaaccggctccagaacactttaggc
aattacgatgaaatgaaagactttctcacggatcgatcaaaccagagtcatcttgtgggt
gttcccaaacctggggttcctcaggctcctgtgaccaagattgatgaacattttgtggca
gattcaagaacccagactcaaccagcatccatctgcagcaccacatctgccccagcagcc
gtccccgggcagcagagtaaacggggcaccgtgggctggcagaaggctgggcacccgccg
tccgatggccaacagagagcaagtaagcacggacacaggacgcttgatctgaacagatct
gctcacccagaaaatcgtaataaaaaccccagccccagtgtgtcaagcccctcctcctca
tcttcctcttcttcttcttccaactcagcacaacagggcgctctcaggaacttgcttggc
gatggcgttggcagacagcaaccgcggaccaaacaggtgtgcaatgtcgaggtgggtctt
cagacccaggacaggccccctgctatgggagccaagcacggcggcagtggccactgcgtg
cagaactttcctccctccctggcttcgaaacccagcctcgtccagcagaagcctaccgcc
tatgtgcggcccatggacggccaagatcaggcgcccgatgagtctccgaagctgaagtcg
tctacagagactggcgtgcactgcttgtacaggggtgtcccggccgccaagtcggagtca
gccagagccaaggccaagctgtccaagttcagcatccccaagcaaggagaggagagtcga
tctggagaaaccaacagctgtgttgaagaaatcattcgggagatgacctggcctccaccg
cttgctgctattcaaccacctggcaaagtggaaccaagcaagtttccatttccaaataag
gactctcagcttgcctcctctggacacaataatccaaagaaaggtgatgccgagccagag
agtccagacaatggcacatcgaatacatcctctctgggatggttatccccatttacagat
aaggggaatgatgcgctgagaggaatgctagaggatgaccttaagctaagcagcgatgaa
gaggaaaatgaacagcaggcagcccagagaacggccctccacgctctgtctgacagtgcc
ggactgcagccggccgactgcagggcctcggcgccctcgagcaagggcagcagcggcggc
agcagcagcagtgggagcagctcctccagcgactcggagaccagctcggggtccgactcg
gagacggagagcagttccagcgagagcgagggcagcaagcctgcccactgctccagcccc
gaggcggaaccagcgtcctctaacaaatggcagctggataaatggctgaacaaagtgaat
caccacaagccccctgtcctgatccaaaatgaaagccaccacgggccggagagcagtcag
tactacaccccagtgaaggaggacacgcaggactgcgggaagctccctgacgtctgcccg
cctggcctgagagacaaggacatcaagggcgcctgcaaggaggagcagaggccgaggacc
gcgaacaaggccccggggagcaagggggtgaagcagaagtccccgcccgcggccgtggcc
gtggccgtgaccgccgccgccgccccaccgcccgcggtgcctggcgcgcccgccgagagc
gcgcccgcgcctgcccggaggtccgcgggcaagaagcccgcccggcgcaccgagaggacc
tcggcctgcgacagcggcccccggcccgaggagcccgtggctgccgaggcgctgggggcg
agcgcggggcttcccccggagccccccaagccccggccttgcggcaacagcaggaccaac
caccgcaaggagctgcgctcggccgtgacctgcgagaagcgccgcacgcgggggctgagc
cggatcgtcccgaaatccaaggagttcatcgagacggagtcgtcctcttcgtcctcctcc
tcggactcggacctggagtcggagcaggaggactaccctctgtccaaggccgtggccgca
gccgccgccgccgccgccgcctccgcctccgggaacgacccgaggctgaaggaggctccc
agcagcatcagcggtggcggcccccgcgctcccgtgggctccatcaacgccaggaccacc
agcgacattgccaaggagctggaggagcagttctacacactggtccccttcggccgcaac
gagcttctctccccgttgaaggacagtgacgaggtccggtcactctgggtcaaaattgac
ctgacacttctgtccaggatcccagaacacctgccccaggagccgggggtcttgagtgct
cccgcggccaaggactctgagagcgcgcccccgagccacgcatccgaggcgcccgtggaa
aagaccttgccaaaatccaagaggaaacgcaagtgtgacaacgaagacgactacagggag
atcaagaaggccccaggagagagggagagctcctcacgactgaccgcctctgccaacagt
actttgcccgcaaatcattgcagcatgaacatcaacagcttggcaataccaataaataaa
aatgaaaaaatgctccggtcgcccatctcacccctctccgacgcatctaaacacaaattc
tccggcgaggacttaacttcctccagcagatccaacagcaacggtctgctcacttccacc
tcctccaacaaaaagcataaggtggagagccagctgcagacgcacgccgcggacctcatg
aaagcggctcacaacaattccgaaagcattctccacaagtcacggccacagacagagccc
tggtctccaggcaccaacggccaccgggactgcaagaggcagaaactcatcttcgatgat
atgccacgcagtgcagattattttatgcaagaagctaagcgaatgaagcataaagcagat
gcgatggtggaaaagtttggaaaggctctgaactatgcagaagcagccttgtcattcatt
gagtgtggaaatgccatggaacagggccccatggagtccaaatctccttacaccatgtat
tcagagacagttgagctaatcaggtatgccatgagactaaaaacgcactccagccccaat
gccacaccagaggataaacagctggctgcattatgttaccgatgcctggctcttctgtac
tggaggatgtttcgactcaaaagggatcacgctgtgaagtattcaaaagcacttatcgac
tatttcaagaattcatctaaagctgcccaagccccatctccatggggggccagtggaaag
agcactggaaccccatcccccatgtctcccaacccgtcccccaccggctccgtgggctct
caggggagcctgtccaacgccaacgccctgtccccatcaaccatcgtcagcatcccacag
cgcatccaccagatggcagccaaccacgtcagcatcaccaacagcatcctccacagctac
gactattgggagatggcggacaacctggccaaggaaaacagagaattcttcaacgacctg
gacctgctcatggggccggtcacactgcacagcagcatggagcatctggtccagtactcc
cagcagggcctgcactggctgcggaacagcgcccacctggcctga
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