Odocoileus virginianus (white-tailed deer): 110152478
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Entry
110152478 CDS
T10722
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110152478 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110152478 (ERCC6)
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110152478 (ERCC6)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110152478 (ERCC6)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110152478 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110152478
NCBI-ProteinID:
XP_020771895
UniProt:
A0A6J0ZCW4
LinkDB
All DBs
Position
7:complement(76631754..76706688)
Genome browser
AA seq
1481 aa
AA seq
DB search
MPNERIPDSSQTQEQDCSQSQAVSVSEEGTIKQEKDGDMDPGQSLPSCSSANGPSTSTEG
GLLELPRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
NRVAQLAEAEKEYRSVLDDLTSCTTSLRQIDKIIEQLGPQAATNKDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVKVELDHASLEEEDAEAEPSCLGSMLMPAQETAWEEL
VRTGQMTPFGTKIAQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRAAKKAV
ASATPELSSTLRENKPDERGKVLSKTDKRLKKKIKKLQKRALQLQGQVGSLKGKKPWDCD
VRPKAEGDSEGEDSEYLPTEEELEEAVGADLPGEGTDWEQRLVLSRRKRQKKVTVQEIDD
DFFPSSGEEAEATGGGRKVVRCRDDGDEDYYKQRLRRWKKLRLKDKEQSLRPEDDSEESD
AEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKL
VREIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHR
IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC
ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN
GEMQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELGEDQFGYWKRSGKMIVVESLLKI
WHKQGQRVLLFSQSRQMLDILEVFLRAQNYSYLKMDGTTAIASRQPLITRYNEDTSIFVF
LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE
KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQ
TPKRHLKRRLQPACGTDQNVPVGKKFPDCKTSANDAMSSEETSIGSGAEVNAVTSDQGIP
LNDAAQIPHSLTSSERLGEETDTVSRPQESLASHENGDSSDSPKISRTYGTSGEESINEK
ESLSDKRESCQVQGEPLWEKEQTENNFYKHKSKMKHHVAEETMEKHLGPNQKPKSSKHRR
DAKFEGTRIPHLVKKRQYRRRDNENESEAKERSHDDYVLAKLFRKSVGVHSVMKHDAIMD
GASPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGLAGAPAGKKSRFGQ
KRNSSFPVQHPSSASPKEKCQDGAVKRDGKDHASEHFSGKVEDTESSSGALASSSLLAKM
RARNHLILPERLESESGHLPEAAAPLHCSTEHDDLLVEMRNFIAFQAQVDGQASTREILQ
EFESKLSASQSCVFRELLRSLCTFHRTSAGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaagaatccccgactcaagtcaaactcaggagcaagactgttcacagagc
caggctgtcagtgtcagtgaagaggggacaatcaagcaggagaaggatggcgacatggac
ccggggcagagcctcccctcttgttcctctgctaatggaccctccacttccaccgaaggg
ggtctcttggaacttcccaggagagggcccgccctgctgcacatcgacagacatcagatc
caggcggtggagcccagcgcgcaggccctggagctgcaggggttgggtgtagatgtctat
gaccaggatgtgctggagcagggggtgcttcagcaggtggacagcgccatccatgaggcc
aaccgcgtggcccagcttgccgaggcagagaaggagtatcggtcagtcctggacgacctc
acgtcatgtacgacatccctaagacagattgataaaattattgaacaacttggccctcaa
gctgccaccaacaaagacatcaacaggaaactagattctgtaaaacgacagaagtataac
aaggaacaacagctgaagaagatcacagcaaaacaaaagcgactccaggccatccttgga
ggagcagaggtaaaagttgaactagatcatgccagtctggaggaggaggatgcagaagcg
gagccatcctgccttggcagcatgctcatgcccgctcaggagaccgcttgggaagagctc
gtccgcactggccagatgacaccttttggtaccaagatcgctcagaagcaggagaaaaaa
cccagaaaactaatgctcaatgaagcgtcaggctttgaaaagtatttggcagatcaagcg
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagagcagctaaaaaagctgtg
gcctcggccactcctgagctgagctcaacactccgtgaaaacaaaccagacgagagaggc
aaagttctatcgaaaacagataaacgcctgaaaaaaaaaatcaagaaactccagaagagg
gctcttcagctccaggggcaggtgggatcgctaaagggaaagaaaccctgggattgtgat
gtgagaccaaaggcagagggggactcggagggtgaagactctgagtacttgcccacggag
gaggagctggaggaggcggtgggtgccgacctgcctggggaagggactgactgggagcag
aggctggtgctcagtcgccggaaacggcagaagaaagtcactgtgcaggagatcgatgat
gacttttttccaagttctggggaagaggctgaagccacgggaggaggtcggaaggtagtg
agatgccgagatgatggagatgaagattattataagcaacgattaagaagatggaagaaa
ctgagactgaaggacaaagagcagagtttgaggcctgaagatgattctgaggaaagcgat
gctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaaactttttaagtac
cagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggagggattctg
ggagacgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctgagc
tacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggtccgaccata
attgtctgtccaacaacggtgatgcatcagtgggtgaaggaatttcacacatggtggcct
ccattcagagtggcaattctgcacgaaacggggtcctttacccacaaaaaggagaaacta
gttcgagagattgctcattgtcatgggattttgatcacttcttactcctacattcgactg
atgcaagatgatattagcaggcatgactggcactatgtgatcttggatgagggacacaaa
attcgaaatccaaatgctgccatcacccttgcttgcaaacagttccgcacacctcatcgc
atcatcctgtctggctcaccaatgcagaataacctccgagaactgtggtctctctttgac
ttcatcttcccgggaaagctgggtacattgcctgtgtttatggagcagttctcagtcccc
atcaccatggggggttattcaaacgcctccccggtacaggttaaaactgcttataagtgt
gcgtgcgtcttacgagataccataaatccatacttactacggagaatgaagtcggatgtc
aaaatgagcctttctttgccagataaaaacgaacaggtcttgttttgccgtcttacagat
gaacaacataaagtctaccaaaatttcattgattccaaagaagtttacaggattctcaat
ggagagatgcagattttctctggacttgtagccctaagaaaaatctgcaaccaccctgat
ctcttttctggaggccccaagaatcttaaaggcattccagacgaggaactaggggaagat
cagtttggatactggaagcgttctgggaaaatgatagttgttgagtccttgctgaaaata
tggcacaagcagggccaacgagtgttgctgttttctcagtccagacagatgttggacatc
cttgaagtatttctcagagcccaaaactattcctatctcaagatggatggcaccacggcg
atagcttccagacaaccactgattacaagatataatgaggacacatccatatttgtgttt
cttctgaccactcgggtgggtggcctaggagtcaacctgacgggcgcaaaccgcgtcatc
atctatgatcccgactggaacccaagcacagacacgcaggcccgggagcgagcgtggagg
ataggccagaagaagcaggtgacggtgtataggcttctgactgcaggcaccattgaagaa
aagatttaccaccgacaaatcttcaagcagtttttgacaaatagagtgctaaaagatcca
aagcaaagacgatttttcaagtccaatgatctttatgagctgtttactctgagtagtcct
gatacatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgttcag
acacccaaacgccatttaaaaagaagacttcagccggcctgtggaacagaccagaatgtc
ccagtgggcaaaaagttccctgattgtaagacatctgcaaatgatgccatgtcatctgaa
gagacatctataggatcaggcgctgaagtgaatgcagtaacttctgaccaaggcattcct
ttgaatgatgctgctcagatacctcatagtctaaccagcagtgagaggcttggagaagag
acagatacagtctccagaccacaggagtccttagcaagtcatgaaaacggggacagttca
gattctccaaaaatcagcagaacatatgggacgtctggtgaggaaagcatcaatgaaaag
gagagtctttctgataaaagagagagctgccaggttcagggagaacctctttgggagaag
gagcaaacagaaaataatttttataaacacaaatcgaaaatgaaacatcacgtggcagaa
gagaccatggagaaacacctggggccaaatcaaaagccgaagagctctaagcaccgcaga
gacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcagtaccggagg
cgagacaatgaaaatgagagcgaggccaaggaacgcagccatgacgactatgtcttggca
aagcttttcagaaaatcagtgggcgtgcacagtgtcatgaagcacgacgccatcatggat
ggagccagtccagactacgtcctggtggaggcggaggccaaccgcgtggctcaggatgcg
ctcaaagcactgagactttctcggcagcagtgtctgggagcagcgtctggtgttcccact
tggactggccacagagggcttgctggggcaccagcaggaaaaaagagcagattcggtcag
aaaaggaactccagtttccctgtgcagcatccgtcttcagcatctccaaaggaaaaatgc
caggacggcgctgtgaagagggatggaaaagatcatgcttcggagcattttagtggaaaa
gttgaagacacagagtcttcatccggggccctcgcttcatcctcactcttggctaaaatg
agagctagaaaccacctgattttgccagagcgcttagaaagtgaaagcgggcacctccca
gaagctgctgctccgctgcactgtagcacagaacacgatgaccttctggtggaaatgaga
aacttcattgcctttcaggcccaagttgatggccaggccagcacccgggaaatactgcag
gagttcgagtccaagttatcagcatcacagtcttgtgtctttagagaactcttgagaagt
ctgtgcacttttcatagaacttctgctggtgaaggcatttggaaactcaagccagaatac
tgctga
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integrated database retrieval system
