Odocoileus virginianus (white-tailed deer): 110152789
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Entry
110152789 CDS
T10722
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03030
DNA replication
ovr03410
Base excision repair
ovr03420
Nucleotide excision repair
ovr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110152789 (RFC1)
03410 Base excision repair
110152789 (RFC1)
03420 Nucleotide excision repair
110152789 (RFC1)
03430 Mismatch repair
110152789 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovr03032
]
110152789 (RFC1)
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110152789 (RFC1)
DNA replication proteins [BR:
ovr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110152789 (RFC1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110152789 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
RuvB_N
Rad17
AAA_18
AAA_17
AAA_30
AAA_33
AAA_16
AAA_7
nSTAND3
Zeta_toxin
RNA_helicase
NTPase_1
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110152789
NCBI-ProteinID:
XP_070308119
UniProt:
A0ABM4GXS3
LinkDB
All DBs
Position
21:7604542..7677128
Genome browser
AA seq
1144 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEESLKAKKGIKEIKVNSSCKEDEFKPKQSN
KKKRIIYDSDSESEETVQVKNAKKRPEKSPLSSKPAKTRQQDPVTYISETDEDDDFVCKK
TASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKK
MVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPQTRK
AEKGAEEKETFSSVQVNLCKAEKPKYPHKEQFSDERKNFSPKKQTKCVGSRESQQRSRSS
AHKTGETSPKASSKLALLKKKEESYNKETQSVASKRKENVIELKETRTPKKIKSSPAKKE
SISPDDAEKRRSNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKSSPTKKESESKKCKLTPKRESSIKSLKK
EASMSQRGLDFKEQAAEETNGDGRARNLADDSSESRVESLLWVDKYKPASLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLV
CQELGYSYVELNASDTRNKNSLKETVAESLNNTSIKGFYSSGTVHAVGMKHALIMDEVDG
MAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDI
KLGPFDVARKVFVTGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDAKKH
LMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLG
KYSSMGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLASQGMEGVQDVVAL
MDAYYLMKDDFENIMEISSWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVKTHR
PSTGPSLDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKGKGK
SSKK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttattccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaagtttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgaattcaagccgaagcagtcaaac
aagaaaaagaggatcatctatgattcggattcagaatcagaggaaacagtacaggtaaaa
aatgccaaaaagcgaccagaaaaatcgccactgtcttctaaacctgccaaaacccgacag
caggatcctgtcacgtacatttcagaaacagatgaagatgatgactttgtgtgtaagaag
acagcctctaaatcaaaagaaaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaggaaaacactaagaccaagaataagcctttgtcaccaataaaactt
acccccacatcagtgctggattattttggaactggaagcatccaaagatcagacaagaag
atggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgcagagctggagagacagctgcac
gaagatgaagagtttgctagaacgttagccatgttggacgaagaaccccagaccaggaag
gctgaaaagggcgcagaagaaaaagagacattttcatctgtacaagtgaatttatgtaaa
gcagagaaacctaaatatcctcataaagagcaattttcagatgaaaggaagaacttcagc
cctaagaagcaaactaagtgtgtaggttcaagagaatcccagcaacgttccaggtcatca
gctcataaaacaggggaaacttctccaaaagccagttctaagctggcacttttgaaaaag
aaagaagagagttataataaagaaacacagtctgtggcttcaaaacgaaaagaaaatgtt
attgagttaaaagagacaagaactcctaagaaaatcaaaagttctccagctaaaaaagag
tctataagtcctgatgatgctgaaaagagacgcagtaattaccaagcttaccgaagctac
ttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacatttgtaatcacaggagtgctggagtccatcgaacgagatgag
gccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtcagcaagaaaaca
aactacctggtcatgggtcgtgatagtggtcaatccaagagtgacaaggcagcagccttg
gggacaaatattattgatgaagatggcctgttgaatctgattcgaactatgccaggcaag
aagtccaagtatgaaatagccgctgaagctgagatgaagaaagaaaaatccaaattggaa
agaacaccccaaaaaaatgaccaaggaaaaagaaaaagtagtccaactaagaaggaatca
gaatctaaaaagtgcaaactgactcccaaaagggaaagctctataaagtcactaaagaag
gaagcaagtatgtctcagagaggcctggacttcaaggagcaggcggctgaggagacaaat
ggtgacggccgggctaggaatttggctgatgacagcagtgaaagcagagtggaaagtttg
ctctgggtggataagtataagccagcctcactcaagaccataattggacagcaaggtgac
cagagctgtgccaacaaactcctgcgctggctccaaaactggcacaagagtccatccgaa
gataagaaacatgcagcaaagtttggtaaattcgctggcaaagatgatggctccagtttc
aaagcggccttgctctcaggccctcccggcgttggcaaaacaaccacagcttctctggtt
tgtcaggaattgggatatagctatgtggagctgaatgcaagtgacactcggaataagaac
agtctgaaggagactgttgctgagtcgctgaataataccagcatcaaaggcttttattca
agtggaacagtccatgcagtaggcatgaagcatgctctcatcatggatgaagtagatggc
atggctggcaatgaggacagaggaggaattcaggaattaattggcctgataaaacataca
aaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatccgctctttggtt
cattattgttttgatcttcgttttcaaagacctcgggtcgaacagatcaagggtgctatg
atgtctattgcatttaaagagggtctaaagataccccctccagctatgaatgaaataatc
ttaggagctaatcaagatatcagacaggttttacacaatctgaatatgtggtgtgcacga
aataaggcactgacctatgaccaggccaaggctgattctcatagagccaaaaaggatatc
aaactgggcccgtttgatgttgcccgcaaagtgttcgtaactggagaggagactgctcat
atgtcacttatggacaaatcagatctctttttccatgattattcgatagcacccctcttt
gtccaggagaactacatccatgtgaagcctgtagctgcagggggtgacgcgaaaaagcac
ctgatgcttttaagcagagcagcagacagcatatgtgacggtgacctagtggaccgccaa
atccggaacaagcaaaactggagtcttctgcccacacaggccatttatgccagtgttctt
cctggagagttaatgagggggtacatgacccagtttcctaccttcccaagttggttgggg
aagtactcatctatgggcaaacacgatcgtattgttcaggacctagctttgcatatgagt
ctcagaacttactccagcaaaaggacagtaaacatggactatctgtcacatataagggat
gcacttgtacagcccttggcctcacaagggatggaaggagtacaggatgttgttgctctc
atggacgcgtattatttgatgaaagatgacttcgagaatattatggaaattagcagctgg
ggaggcagacctagtccgttctctaaactggatcccaaggtgaaagccgccttcacaaga
gcttacaataaagaagtccacctcactccgtattcactccaggcagtgaagacacacagg
cccagcacaggcccgtcgctggattctgaatacaacgaagagttaaatgaagatgactct
caatcggatgagaaggaccaggacactttggaaactgatgctatgatcaagaaaaagaca
aaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaa
agttcaaagaaatga
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integrated database retrieval system
