Odocoileus virginianus (white-tailed deer): 110152847
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Entry
110152847 CDS
T10722
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110152847 (RFX1)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Other basic domains
RF-X
110152847 (RFX1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
110152847
NCBI-ProteinID:
XP_070319199
UniProt:
A0ABM4HUH0
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Position
3:9589377..9623334
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AA seq
1099 aa
AA seq
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MATQAYVTELQAAPQPSQPPQAPPQAQPPPPPSAAPQPPQPPATAATPQPQYVTELQNPQ
PQAQPPGSQKPYVTELPAAPTPSQPAGAPTPSPASQQYIVVTVSEGAMRASETVSEASPG
STASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVPQQALPTQRLVVQS
TAPGGKGGQVSLTVHGTQQVHSPPERSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQSVP
VTQERSVVQATPQVPKAGPVQQLTVQGLQSVHVAQESSGSQFPARKAEQQEPWPTPPPEP
PPPRPPTPGPGPRALAPEPPACRGEAPQLGSPEPLPPHYEPGAEQWVELVGFLPPHLLLP
QQKVVLEPLPGLPARASPDQRVRIQRVPQVLVFGTAATALKVQQLQQVPVSHVYPSQVQY
VEGGDASYTASAIRSSTYSYPETPLYPQTASTSYYEATGTAAQVSTPATSQAVASSGSVP
MYVSGSQVVASSTSSGSAASSGGSGSGSGGSGGGGGGGGGGSGGGSGGGAGTYVIQGGYM
LGGASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASF
GKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRL
KPIQKMEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLPDFSELDLQGKVLPEGI
GPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEK
RLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLES
WLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNR
VDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSA
GFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGE
TPIAVMGEFANLATSLNSLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPEALEPP
AKLARTDARGLFVQALPSS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcgtacgttactgagttacaggcggccccgcaaccatcccagccacca
caggctccgccacaagcccagccgccaccgccgccctccgcggcaccccagcccccccag
ccccccgccaccgccgccaccccccagccccagtatgtcaccgagctgcagaatccgcag
ccccaggcacagccaccgggcagccagaagccgtatgtgacagagctcccggctgccccc
acgccctcgcagccggccggcgcacccaccccgtccccggcgtcccagcagtacatcgtg
gtcaccgtctccgagggtgccatgcgggccagtgagactgtgtcggaggccagcccgggc
tccacggctagccagaccggagtccccactcaggtggttcagcaggtgcagggcacccag
cagcggctactggtccagacaagcgtgcaggccaagccgggccatgtgtcacccctccag
ctcaccaacatcccggtgccccagcaggctctccccacgcagcgtctggtagtgcagagc
acagccccgggcggcaagggtggccaggtctccctgacggtgcacggcacccagcaagtg
cactcaccccccgagcggtcaccagtgcaggccaacagctcctccagcaagacggccggg
gcccccacgggcacggtgccgcagcagctgcaagtccatggcgtccagcagagtgtcccc
gtcacccaagagaggtcagtggttcaggccactccacaggtgcccaaagctggccccgtg
cagcagctcacggttcaaggactccagtcggtccatgtggctcaagagagctcaggcagt
cagtttcccgctaggaaggcagagcagcaagagccctggcccacgccgccaccggagccg
ccgccgccccggccgcccacgcctgggcccgggccgcgtgcgctggccccggaaccgcca
gcttgccgcggggaggccccgcagctaggcagccccgagccgctgccgccccattacgag
ccgggcgccgagcagtgggtggagctggtgggcttcctgcccccgcacctgctcctgccg
cagcagaaagtggtcctcgagccactgcccgggctgccggcccgagccagccccgaccag
agggtcaggatccagagagtcccccaggtgctagtgttcggcacggccgccacggccctc
aaagtgcagcaactccagcaggtgccagtctcacacgtgtatcccagccaagtgcagtac
gtggagggcggtgatgccagctacacggcgagtgccatccgctccagcacctactcctac
ccggagacgccactgtacccgcagacggcaagcaccagctactacgaggccacgggcacg
gctgcccaggtcagcacccctgccacttcccaggcggtggccagcagcggctctgtgccc
atgtacgtgtctggcagccaggttgtcgccagctccaccagcagtgggagtgcagccagc
agcggcggcagcggcagtggcagcggcggcagcggcgggggtggtgggggcgggggtggc
ggcagcggcggcggcagcggcggcggcgcaggcacctacgtgatccaaggcggctacatg
ctgggcggtgccagccagtcctactcccacaccacccgtgcctcaccagccaccgtccag
tggctcctggacaactacgagacggccgagggcgtgagcctgccgcggagcaccctgtac
tgccactacctgctgcactgccaggagcagaagctggagcccgtcaacgccgcctccttc
ggcaagctcatccgctccgtcttcatgggcctgcgcacccgtcgcctcggcaccaggggc
aactccaagtaccactactatggcctgcgcatcaaggccagctcgcccctgctgcggctg
atggaggaccagcagcacatggccatgcggggccaacccttctcccaaaaacagaggctg
aaacccatccagaagatggagggcatgaccaacggtgtggccgtggggccacagcaggcc
actggactctcggacatcagcgcccaggtccagcagtaccagcaatttctggatgcctcg
agaagcctccctgacttctcagagcttgatctccagggcaaagtgctgcccgagggcatc
ggacctggggacatcaaggccttccaggtcctataccgggaacactgtgaggccatcgtc
gatgtcatggtgaacctgcagttcacactggtggaaacactctggaaaaccttctggagg
tacaacctgagccagcccagcgaggcgccgccgctggctgtgcatgatgaggctgagaag
cggctgcccaaggccagcctggtgctcctctccaagttcgagcctgtgctgcagtggacc
aagcactgtgacaacgtgctgtaccagggcctggtggagatcctcatccccgacgtgctg
cggcccatccccagtgccttgacccaagcgatccggaactttgccaagagcctggagagc
tggctcacccacgccatggtgaacatccccgaggagatgctgcgggtgaaggtggcagcg
gccggcgccttcgcgcagaccctgcgtcgctacacgtcgctcaaccacttggcacaggcg
gcgcgcgctgtgctgcagaacaccgcgcagatcaaccagatgctgagcgatctcaaccgc
gtggacttcgccaacgtgcaggagcaggcctcgtgggtgtgccgctgcgaggaccgcgtg
gtgcagcgactggagcaggacttcaaagtgacgctgcagcagcagaactcactggagcag
tgggcggcttggctggatggcgtcgtgagccaggtgctcaagccctaccagggcagcgcc
ggcttccccaaggccgccaagctcttcctcctcaagtggtcattctacagctctatggtg
atccgggacctgaccctgcgcagcgccgccagcttcggctccttccatctcatcaggctg
ctctacgatgagtacatgtactacctgatcgaacatcgtgtggcccaggccaagggcgag
acccccatcgccgtcatgggcgagttcgccaatctggccacttccctgaactccctggac
ccggacaaagacgaggaggaggaggaagaagaggagagcgaggatgagctgccgcaggac
atctctctcgcggctggcggcgagtcgcccgcgctgggccccgaggctctggagccaccg
gccaagctggcgcggacagacgcgcgcggcctcttcgtgcaggcactgccctccagctaa
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