Odocoileus virginianus (white-tailed deer): 139029850
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Entry
139029850 CDS
T10722
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040
Spliceosome
ovr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139029850
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
139029850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
139029850
03041 Spliceosome [BR:
ovr03041
]
139029850
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139029850
mRNA cycle factors
Common to processing body (P body) and stress granule
139029850
Spliceosome [BR:
ovr03041
]
Common components
Common spliceosomal components
hnRNP proteins
139029850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
139029850
NCBI-ProteinID:
XP_070306841
UniProt:
A0ABM4GU38
LinkDB
All DBs
Position
20:9828489..9829715
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AA seq
378 aa
AA seq
DB search
MEVKPPPGRPQPDSGRRRRRWGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPG
AHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEVKKALSKQEMQSSGSQRGCGGGSGNFMGHGGNFGGGGGNFGRG
GNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG
GGYGGGGGGYDGYNEGGNFGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPY
GGGYGSGGGSGGYGSRRF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccgcccggtcgcccccagcccgactccggccgtcgccgtcgccgc
tggggggaggagggtcatgatcccaaggaaccagagcagttgagaaagctgtttatcggt
ggtctgagctttgaaactacagatgatagcttaagagaacattttgagaaatggggcacg
cttacagattgtgtggtgatgagagacccccaaacaaaacgttccaggggctttggcttt
gtgacttactcttgtgttgaagaagtggatgcagcaatgtgtgcacgaccacacaaggtt
gatgggcgtgtagtggagccaaagagagctgtttctagagaggattctgtaaagcctggt
gcccatctaacagtgaagaaaatttttgttggtggtattaaagaagatacagaagaatat
aatttgagagactactttgaaaagtatggcaagattgaaaccatagaagttatggaagac
aggcagagtgggaaaaagaggggatttgcttttgtaacttttgatgatcatgatacagtt
gataaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgaaaaag
gccctttctaaacaagagatgcaatcttctggatcacaaagaggttgtggaggtggatcc
ggcaactttatgggtcatggaggaaactttggaggtggtggaggtaactttggccgtggt
ggaaactttggtggaagaggaggctatggtggtggaggtggtggcagccgagggagttat
ggaggaggtgatggtggatacaatggatttggaggtgatggtggcaactatggcggtggt
cctggttatagtagtagaggaggttacggtggtggtggaccaggatatggaaaccaaggt
ggtggatatggtggcggtggtggaggatatgatggttacaatgaaggaggaaattttgga
ggtaactatggtggtggtggaaactataatgattttggaaattatagtggacaacagcaa
tcaaattatggacccatgaaagggggtagttttggtggaagaagctcgggcagtccctat
ggtggtggttatggatctggtggtggaagtggtggatatggtagcagaaggttctaa
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