Odocoileus virginianus (white-tailed deer): 139032390
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Entry
139032390 CDS
T10722
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139032390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
139032390
03036 Chromosome and associated proteins [BR:
ovr03036
]
139032390
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139032390
Coactivators
SAGA/TFTC/STAGA complex
139032390
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139032390
STAGA complex
139032390
TFTC complex
139032390
SAGA complex
139032390
SLIK complex
139032390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR41
CFAP251_N
NBCH_WD40
Beta-prop_RIG_2nd
PAC11
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
RMC1_N
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
ASA1
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
eIF2A
WD_LRWD1
Beta-prop_IP5PC_F
Ge1_WD40
Nbas_N
TRM82_WD
PD40
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
139032390
NCBI-ProteinID:
XP_070315311
UniProt:
A0ABM4HIC6
LinkDB
All DBs
Position
31:7799767..7802706
Genome browser
AA seq
596 aa
AA seq
DB search
MFPTLWVMKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSTEEMAASLAVQSESG
CANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPK
STVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYN
YLLRYLQSDNNTALCRVLAWHIHLDVQPAKRTDYQLYASGGSSRGEGGGLEPADVPAPIL
QNEAALELLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIK
LWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKVLRGHCGPVYSTRFLAD
SSGLLSCSEDMSIRYWDLGSFTNTVRYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSF
DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS
LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS
VRVWDIRSAHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQESQEH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttccctaccctatgggtcatgaaacgggtccgcaccgagcagatccagatggccgtg
tcctgctacctcaaacgccggcagtacggggatgcggatggcccactgaagcaaggcctg
cggctgtcacagagcaccgaggagatggctgccagccttgcagtccaatcagaatctggt
tgtgccaacatagtgtccgcagccccttgccaggcagagccccagcagtatgaagtacag
tttggacggctgcggaattttctcaccgattctgactcccagcacagccacgaagtgatg
cctctcctctaccctctctttgtctacctccatctcaacctggtccagaacagtccgaag
agcacagtggaaagcttttacagccgcttccatggaatgtttctgcagaacgccagccag
aaggatgtcatcgagcagctccagaccacacagaccatccaggacatcctgtctaacttc
cggctgcgagccttcctggacaacaagtacgtggttcgtctgcaggaagacagctacaac
taccttctccgctacctccagagtgacaacaacaccgcgctgtgcagggtcctcgcctgg
cacatccacctggacgtgcagcccgccaagaggacggactaccagctctacgccagcggg
ggctcttcccgcggcgagggcggtggcctggagcccgccgacgtgccggcgcccatcctg
cagaatgaggccgcgctggagctcctgcaggagagcatcaagcgcgtcaaggacggcccc
ccctcgctcaccaccatctgcttctacgccttctacaacacagagcagctgctgaacact
gcagaggtctccccggacagcaagctgctcgcggcaggcttcgacaactcctgtataaaa
ctgtggagtctgcgctccaagaagttaaagtcagaaccccatcaagtagatgtgtcccgc
atccacttggcttgtgatatcctcgaagaggaggatgacgaggatgacaatgcaggcacg
gagatgaaggtcctgcggggacactgcgggccagtgtacagcaccaggttcctcgcggac
agctcggggctgctctcctgctccgaagacatgtccatcaggtactgggacctgggcagc
ttcaccaacaccgtgcggtaccagggccatgcataccccgtatgggacctggacatcagc
ccgcatagcctgtacttcgccagcgggtcccacgaccgcacggcccggctgtggtcattt
gatcggacgtacccactgcgaatctacgccgggcacctggcagacgtggactgtgtcaag
ttccaccccaattcaaactacttagccacgggctcgaccgataagacggtgcggctgtgg
agcacccagcaggggaactcagtgaggctcttcacgggccaccgcggccctgtgctctcc
ctggccttttcccccaatggtaagtacctggcatccgcgggcgaggaccagcggctgaag
ctttgggacctggcgtccgggaccctctacaaagagctgcggggccacacggacaacatc
accagcctgaccttcagcccggacagcagcctgatcgcgtccgcatccatggacaactct
gtgcgcgtctgggacattagaagcgcgcactgcagcacccccgcggacggctcatccagc
gagctcgtgggcgtctacactggccagatgagcaatgttctgagcgtgcagtttatggcc
tgcaacctcctgctggtgaccggaatcacacaagaaagtcaggaacattga
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