Odocoileus virginianus (white-tailed deer): 139036022
Help
Entry
139036022 CDS
T10722
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139036022 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
139036022 (CSTF2T)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
139036022 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
139036022 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139036022
NCBI-ProteinID:
XP_070326670
UniProt:
A0ABM4IFT1
LinkDB
All DBs
Position
7:40864306..40868226
Genome browser
AA seq
606 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHL
ARRPVKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQ
VQISDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPM
HHAAGHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAME
TEVLETRVMERRGMETCAMETRGMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMG
AGGPQGPRQVPSISGVGNPAPGMQGAAMQGGGMQGAGIQGAGMQGAGMQGAGMQGAGMQG
AGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQ
KSTGTS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcaactgaagagcagttaaaggacattttctctgaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcgcttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgcgtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccccatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttatgcgctgttgcaggcacaagtggtgatgaga
atcatggatccagagattgctctgaaaattctgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaatccgtttctggccctggccctggccccggccctgggctctgt
cctggacctaacgttctgctgaaccagcagaaccccccggcccctcagcctcaacatttg
gccagaagacctgtgaaagacatccctcctctgatgcagacccctattcagggtggaatt
ccaccccaaggcccgatgccagccgcagttcctggccctggccccttaactcctggtgga
acaatgcaaccccaagttggaatgccaggagttggccccgtgcccttagagcgggggcag
gtgcagatatctgatcccagagctcctatgcctcgtggacccatgactgctggtggcctg
cctcctcgaggactgttgggggatgctccaaatgacccacgtggagggactttgctttca
gtcactggagaggtggagcccagaggctatcttggcccaccgcatcagggtcctccaatg
caccatgccgctggtcatgacagccggggcccttcctcacatgagatgaggggagggcca
ttggcagatcctagaatgctcatgagtgagcccagaggacctatgatagatcaaaggggg
ctacctatggatggcagaggcagcagagactctcgagggatggagactcgagccatggaa
acagaggtcttagagacacgagtgatggagagaagaggaatggagacctgtgcaatggaa
accagaggaatggaagcgagaggcatggatgcaagaggaatggagatgaggggccctggc
cccagttcgagaggccctatgactgggggaattcagggtccaggtcctattaatatgggg
gcaggtggtcctcagggacccagacaggttcccagcatttcaggggtgggaaaccctgca
cctggcatgcagggggcagctatgcaaggaggtggcatgcagggggcgggcatacaaggt
gctggcatgcagggggcaggcatgcaaggagctggcatgcagggggcgggcatgcaaggg
gcaggcaagcaaggtggaggccagcctagcagttttagtcctgggcagagccaagtaacc
ccccaggatcaagaaaaggcagctttgatcatgcaggttcttcagctgactgcagatcag
attgccatgctgcctcctgagcaaaggcagagtatcttgattttaaaggaacaaatccag
aaatctactggaacttcttga
DBGET
integrated database retrieval system
